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RIMBP2 RIMS binding protein 2 [ Physeter catodon (sperm whale) ]

Gene ID: 102995472, updated on 10-Mar-2024

Summary

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Gene symbol
RIMBP2
Gene description
RIMS binding protein 2
See related
Ensembl:ENSPCTG00005017069
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 19 NC_041232.1 (23944855..24222952, complement)
102 previous assembly ASM283717v2 (GCF_002837175.2) 19 NC_041232.1 (23947796..24222954, complement)

Chromosome 19 - NC_041232.1Genomic Context describing neighboring genes Neighboring gene frizzled class receptor 10 Neighboring gene piwi like RNA-mediated gene silencing 1 Neighboring gene syntaxin 2 Neighboring gene RAN, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RIMS-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041232.1 Reference ASM283717v5 Primary Assembly

    Range
    23944855..24222952 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055080474.1 → XP_054936449.1  RIMS-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A9W2WB56
    Related
    ENSPCTP00005024464.1, ENSPCTT00005026960.1

  2. XM_055080471.1 → XP_054936446.1  RIMS-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A9W2WB56

  3. XM_055080470.1 → XP_054936445.1  RIMS-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A9W2WB56

  4. XM_055080467.1 → XP_054936442.1  RIMS-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A9W2WB56

  5. XM_055080469.1 → XP_054936444.1  RIMS-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A9W2WB56

  6. XM_055080468.1 → XP_054936443.1  RIMS-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A9W2WB56

  7. XM_055080473.1 → XP_054936448.1  RIMS-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A9W2WB56

  8. XM_055080475.1 → XP_054936450.1  RIMS-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A9W2WBK3

  9. XM_055080476.1 → XP_054936451.1  RIMS-binding protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A9W2WB25

  10. XM_055080477.1 → XP_054936452.1  RIMS-binding protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A9W2WBB2

  11. XM_055080472.1 → XP_054936447.1  RIMS-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A9W2WB55

  12. XM_028480083.2 → XP_028335884.1  RIMS-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A455AJF6
    Conserved Domains (7) summary
    cd12012
    Location:1108 → 1169
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1212 → 1272
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:185 → 245
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03307
    Location:862 → 1106
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK12323
    Location:496 → 702
    PRK12323; DNA polymerase III subunits gamma and tau; Provisional
    cd00063
    Location:406 → 470
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam15665
    Location:2 → 81
    FAM184; Family with sequence similarity 184, A and B

  13. XM_055080479.1 → XP_054936454.1  RIMS-binding protein 2 isoform X8

    UniProtKB/TrEMBL
    A0A9W2WAW8

  14. XM_055080478.1 → XP_054936453.1  RIMS-binding protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A9W2WBA1
    Related
    ENSPCTP00005024496.1, ENSPCTT00005026994.1

RNA

  1. XR_008615939.1 RNA Sequence

  2. XR_008615942.1 RNA Sequence

  3. XR_008615940.1 RNA Sequence

  4. XR_008615941.1 RNA Sequence

  5. XR_008615943.1 RNA Sequence

  6. XR_003677159.2 RNA Sequence

  7. XR_008615944.1 RNA Sequence

  8. XR_008615946.1 RNA Sequence

  9. XR_008615945.1 RNA Sequence

Nucleotide Protein
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