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OGFOD2 2-oxoglutarate and iron dependent oxygenase domain containing 2 [ Physeter catodon (sperm whale) ]

Gene ID: 102990967, updated on 10-Mar-2024

Summary

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Gene symbol
OGFOD2
Gene description
2-oxoglutarate and iron dependent oxygenase domain containing 2
See related
Ensembl:ENSPCTG00005021348
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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See OGFOD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) Unplaced Scaffold NW_021145496.1 (49560..53146)
102 previous assembly ASM283717v2 (GCF_002837175.2) Unplaced Scaffold NW_021145496.1 (49094..53146)

NW_021145496.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily B member 9 Neighboring gene ADP ribosylation factor like GTPase 6 interacting protein 4 Neighboring gene phosphatidylinositol transfer protein membrane associated 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NW_021145496.1 Reference ASM283717v5 Primary Assembly

    Range
    49560..53146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007104552.4 → XP_007104614.1  2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2

    UniProtKB/TrEMBL
    A0A2Y9EL24
    Related
    ENSPCTP00005029935.1, ENSPCTT00005032904.1
    Conserved Domains (1) summary
    smart00702
    Location:146 → 307
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

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