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ZBTB8OS zinc finger and BTB domain containing 8 opposite strand [ Physeter catodon (sperm whale) ]

Gene ID: 102989624, updated on 10-Mar-2024

Summary

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Gene symbol
ZBTB8OS
Gene description
zinc finger and BTB domain containing 8 opposite strand
See related
Ensembl:ENSPCTG00005000576
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 3 NC_041216.1 (10174557..10200720)
102 previous assembly ASM283717v2 (GCF_002837175.2) 3 NC_041216.1 (10174547..10189314)

Chromosome 3 - NC_041216.1Genomic Context describing neighboring genes Neighboring gene histone-binding protein RBBP4-like Neighboring gene histone-binding protein RBBP4 Neighboring gene transmembrane protein 126A-like Neighboring gene zinc finger and BTB domain containing 8A Neighboring gene zinc finger and BTB domain containing 8B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of tRNA-splicing ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein archease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041216.1 Reference ASM283717v5 Primary Assembly

    Range
    10174557..10200720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024125192.3 → XP_023980960.1  protein archease isoform X2

    UniProtKB/TrEMBL
    A0A2Y9SWN1
    Conserved Domains (1) summary
    pfam01951
    Location:1 → 110
    Archease; Archease protein family (MTH1598/TM1083)

  2. XM_007125085.4 → XP_007125147.2  protein archease isoform X1

    UniProtKB/TrEMBL
    A0A2Y9FLV7
    Related
    ENSPCTP00005000721.1, ENSPCTT00005000806.1
    Conserved Domains (1) summary
    pfam01951
    Location:31 → 167
    Archease; Archease protein family (MTH1598/TM1083)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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