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COPZ2 COPI coat complex subunit zeta 2 [ Physeter catodon (sperm whale) ]

Gene ID: 102988243, updated on 10-Mar-2024

Summary

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Gene symbol
COPZ2
Gene description
COPI coat complex subunit zeta 2
See related
Ensembl:ENSPCTG00005022657
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) Unplaced Scaffold NW_021145381.1 (89487..110470, complement)
102 previous assembly ASM283717v2 (GCF_002837175.2) Unplaced Scaffold NW_021145381.1 (89487..110439, complement)

NW_021145381.1Genomic Context describing neighboring genes Neighboring gene proline rich 15 like Neighboring gene CDK5 regulatory subunit associated protein 3 Neighboring gene NFE2 like bZIP transcription factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPI vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coatomer subunit zeta-2
Names
coatomer protein complex subunit zeta 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NW_021145381.1 Reference ASM283717v5 Primary Assembly

    Range
    89487..110470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028483956.2 → XP_028339757.1  coatomer subunit zeta-2 isoform X3

    UniProtKB/TrEMBL
    A0A455AT55
    Conserved Domains (1) summary
    cd14829
    Location:40 → 225
    Zeta-COP; zeta subunit of the F-COPI complex

  2. XM_055082364.1 → XP_054938339.1  coatomer subunit zeta-2 isoform X1

    UniProtKB/TrEMBL
    A0A9W2WGN7

  3. XM_007109438.4 → XP_007109500.1  coatomer subunit zeta-2 isoform X5

    UniProtKB/TrEMBL
    A0A2Y9EUX6
    Conserved Domains (1) summary
    cl02092
    Location:55 → 189
    Clat_adaptor_s; Clathrin adaptor complex small chain

  4. XM_024130458.2 → XP_023986226.1  coatomer subunit zeta-2 isoform X6

    UniProtKB/TrEMBL
    A0A2Y9T5M0
    Related
    ENSPCTP00005031936.1, ENSPCTT00005035057.1
    Conserved Domains (1) summary
    cd14829
    Location:47 → 178
    Zeta-COP; zeta subunit of the F-COPI complex

  5. XM_028483955.2 → XP_028339756.1  coatomer subunit zeta-2 isoform X2

    UniProtKB/TrEMBL
    A0A455B6W4
    Conserved Domains (1) summary
    cd14829
    Location:47 → 232
    Zeta-COP; zeta subunit of the F-COPI complex

  6. XM_055082366.1 → XP_054938341.1  coatomer subunit zeta-2 isoform X7

    UniProtKB/TrEMBL
    A0A9W2WGG3

  7. XM_028483957.2 → XP_028339758.1  coatomer subunit zeta-2 isoform X8

    UniProtKB/TrEMBL
    A0A455AV52
    Conserved Domains (1) summary
    cd14829
    Location:34 → 165
    Zeta-COP; zeta subunit of the F-COPI complex

  8. XM_055082365.1 → XP_054938340.1  coatomer subunit zeta-2 isoform X4

    UniProtKB/TrEMBL
    A0A9W2WGP5
Nucleotide Protein
Heading Accession and Version

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