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ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [ Physeter catodon (sperm whale) ]

Gene ID: 102986890, updated on 10-Mar-2024

Summary

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Gene symbol
ST8SIA3
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 19 NC_041232.1 (70837862..70875780)
102 previous assembly ASM283717v2 (GCF_002837175.2) 19 NC_041232.1 (70837862..70875780)

Chromosome 19 - NC_041232.1Genomic Context describing neighboring genes Neighboring gene thioredoxin like 1 Neighboring gene WD repeat domain 7 Neighboring gene one cut homeobox 2 Neighboring gene ferrochelatase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041232.1 Reference ASM283717v5 Primary Assembly

    Range
    70837862..70875780
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028479949.1 → XP_028335750.1  LOW QUALITY PROTEIN: sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase

    UniProtKB/TrEMBL
    A0A455AGY5
    Conserved Domains (1) summary
    pfam00777
    Location:275 → 538
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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