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TRAPPC4 trafficking protein particle complex subunit 4 [ Physeter catodon (sperm whale) ]

Gene ID: 102986331, updated on 10-Mar-2024

Summary

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Gene symbol
TRAPPC4
Gene description
trafficking protein particle complex subunit 4
See related
Ensembl:ENSPCTG00005021909
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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See TRAPPC4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) Unplaced Scaffold NW_021146892.1 (19520..22759)
102 previous assembly ASM283717v2 (GCF_002837175.2) Unplaced Scaffold NW_021146892.1 (19511..22759)

NW_021146892.1Genomic Context describing neighboring genes Neighboring gene centrosomal AT-AC splicing factor Neighboring gene enhancer of rudimentary homolog Neighboring gene ribosomal protein S25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAPP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 4
Names
trafficking protein particle complex 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NW_021146892.1 Reference ASM283717v5 Primary Assembly

    Range
    19520..22759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007124182.3 → XP_007124244.1  trafficking protein particle complex subunit 4 isoform X2

    See identical proteins and their annotated locations for XP_007124244.1

    UniProtKB/TrEMBL
    A0A2Y9FIQ5
    Related
    ENSPCTP00005030721.1, ENSPCTT00005033762.1
    Conserved Domains (1) summary
    cd14856
    Location:4 → 205
    TRAPPC4_synbindin; Trafficking protein particle complex subunit 4

  2. XM_024131252.3 → XP_023987020.1  trafficking protein particle complex subunit 4 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9TDV6
    Conserved Domains (1) summary
    cl21566
    Location:97 → 194
    Sedlin_N; Sedlin, N-terminal conserved region
Nucleotide Protein
Heading Accession and Version

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