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RASGEF1A RasGEF domain family member 1A [ Physeter catodon (sperm whale) ]

Gene ID: 102985934, updated on 10-Mar-2024

Summary

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Gene symbol
RASGEF1A
Gene description
RasGEF domain family member 1A
See related
Ensembl:ENSPCTG00005019325
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 20 NC_041233.1 (10875451..10913528, complement)
102 previous assembly ASM283717v2 (GCF_002837175.2) 20 NC_041233.1 (10875451..10914315, complement)

Chromosome 20 - NC_041233.1Genomic Context describing neighboring genes Neighboring gene BMS1 ribosome biogenesis factor Neighboring gene ret proto-oncogene Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 2 Neighboring gene myelin protein zero-like protein 2 Neighboring gene small nucleolar RNA SNORA61

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Ras protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-GEF domain-containing family member 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041233.1 Reference ASM283717v5 Primary Assembly

    Range
    10875451..10913528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024115754.1 → XP_023971522.1  ras-GEF domain-containing family member 1A

    UniProtKB/TrEMBL
    A0A2Y9S245
    Related
    ENSPCTP00005027142.1, ENSPCTT00005029889.1
    Conserved Domains (2) summary
    cd06224
    Location:56 → 171
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
    pfam00617
    Location:225 → 417
    RasGEF; RasGEF domain
Nucleotide Protein
Heading Accession and Version

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