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RAX retina and anterior neural fold homeobox [ Physeter catodon (sperm whale) ]

Gene ID: 102980174, updated on 10-Mar-2024

Summary

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Gene symbol
RAX
Gene description
retina and anterior neural fold homeobox
See related
Ensembl:ENSPCTG00005007481
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 19 NC_041232.1 (72465375..72469538, complement)
102 previous assembly ASM283717v2 (GCF_002837175.2) 19 NC_041232.1 (72465375..72469538, complement)

Chromosome 19 - NC_041232.1Genomic Context describing neighboring genes Neighboring gene SEC11 homolog C, signal peptidase complex subunit Neighboring gene gastrin releasing peptide Neighboring gene complexin 4 Neighboring gene lectin, mannose binding 1 Neighboring gene uncharacterized LOC102977636

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinal homeobox protein Rx

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041232.1 Reference ASM283717v5 Primary Assembly

    Range
    72465375..72469538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024133906.1 → XP_023989674.1  retinal homeobox protein Rx

    UniProtKB/TrEMBL
    A0A2Y9TKL9
    Related
    ENSPCTP00005010484.1, ENSPCTT00005011611.1
    Conserved Domains (3) summary
    pfam00046
    Location:141 → 193
    Homeobox; Homeobox domain
    pfam03826
    Location:321 → 337
    OAR; OAR domain
    cl26939
    Location:44 → 141
    DEXDc; DEAD-like helicases superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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