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TNFSF11 TNF superfamily member 11 [ Physeter catodon (sperm whale) ]

Gene ID: 102978976, updated on 10-Mar-2024

Summary

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Gene symbol
TNFSF11
Gene description
TNF superfamily member 11
See related
Ensembl:ENSPCTG00005004229
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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See TNFSF11 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 13 NC_041226.1 (25007197..25047720, complement)
102 previous assembly ASM283717v2 (GCF_002837175.2) 13 NC_041226.1 (25007197..25047720, complement)

Chromosome 13 - NC_041226.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 216 member B Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene A-kinase anchoring protein 11 Neighboring gene uncharacterized LOC129392677 Neighboring gene diacylglycerol kinase eta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor ligand superfamily member 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041226.1 Reference ASM283717v5 Primary Assembly

    Range
    25007197..25047720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007117317.2 → XP_007117379.2  tumor necrosis factor ligand superfamily member 11

    UniProtKB/TrEMBL
    A0A2Y9F8Q7
    Related
    ENSPCTP00005006068.1, ENSPCTT00005006679.1
    Conserved Domains (1) summary
    pfam00229
    Location:196 → 322
    TNF; TNF(tumor Necrosis Factor) family
Nucleotide Protein
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