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GRHL3 grainyhead like transcription factor 3 [ Physeter catodon (sperm whale) ]

Gene ID: 102978146, updated on 10-Mar-2024

Summary

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Gene symbol
GRHL3
Gene description
grainyhead like transcription factor 3
See related
Ensembl:ENSPCTG00005007387
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 3 NC_041216.1 (16042199..16072148, complement)
102 previous assembly ASM283717v2 (GCF_002837175.2) 3 NC_041216.1 (16042445..16072083, complement)

Chromosome 3 - NC_041216.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114485934 Neighboring gene interferon lambda receptor 1 Neighboring gene RNA transcription, translation and transport factor protein-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC102975696 Neighboring gene serine and arginine rich splicing factor 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
grainyhead-like protein 3 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041216.1 Reference ASM283717v5 Primary Assembly

    Range
    16042199..16072148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055083628.1 → XP_054939603.1  grainyhead-like protein 3 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9W2WKD3

  2. XM_028484708.2 → XP_028340509.1  grainyhead-like protein 3 homolog isoform X1

    UniProtKB/TrEMBL
    A0A455AWE4
    Related
    ENSPCTP00005010398.1, ENSPCTT00005011512.1
    Conserved Domains (1) summary
    pfam04516
    Location:210 → 421
    CP2; CP2 transcription factor
Nucleotide Protein
Heading Accession and Version

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