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ZNF394 zinc finger protein 394 [ Physeter catodon (sperm whale) ]

Gene ID: 102974773, updated on 10-Mar-2024

Summary

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Gene symbol
ZNF394
Gene description
zinc finger protein 394
See related
Ensembl:ENSPCTG00005011596
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 14 NC_041227.1 (75637780..75646464)
102 previous assembly ASM283717v2 (GCF_002837175.2) 14 NC_041227.1 (75637783..75646260)

Chromosome 14 - NC_041227.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129392728 Neighboring gene zinc finger protein 789 Neighboring gene zinc finger with KRAB and SCAN domains 5 Neighboring gene uncharacterized LOC102974486 Neighboring gene transfer RNA tryptophan (anticodon CCA)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 394

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041227.1 Reference ASM283717v5 Primary Assembly

    Range
    75637780..75646464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007108755.4 → XP_007108817.2  zinc finger protein 394

    UniProtKB/TrEMBL
    A0A2Y9ETL1
    Related
    ENSPCTP00005016294.1, ENSPCTT00005017975.1
    Conserved Domains (4) summary
    smart00431
    Location:45 → 155
    SCAN; leucine rich region
    smart00349
    Location:140 → 199
    KRAB; krueppel associated box
    COG5048
    Location:334 → 636
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:560 → 580
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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