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EPN3 epsin 3 [ Panthera tigris (tiger) ]

Gene ID: 102968679, updated on 10-Mar-2024

Summary

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Gene symbol
EPN3
Gene description
epsin 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: E1
Exon count:
11
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) E1 NC_056673.1 (34863899..34874900, complement)

Chromosome E1 - NC_056673.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122233418 Neighboring gene spermatogenesis associated 20 Neighboring gene MYCBP associated protein Neighboring gene uncharacterized LOC122233703

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056673.1 Chromosome E1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of clathrin vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epsin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056673.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    34863899..34874900 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042967252.1 → XP_042823186.1  epsin-3 isoform X2

    Conserved Domains (2) summary
    PHA03247
    Location:300 → 617
    PHA03247; large tegument protein UL36; Provisional
    cd16990
    Location:19 → 142
    ENTH_Epsin; Epsin N-Terminal Homology (ENTH) domain of Epsin family

  2. XM_042967250.1 → XP_042823184.1  epsin-3 isoform X1

    Conserved Domains (3) summary
    smart00726
    Location:228 → 247
    UIM; Ubiquitin-interacting motif
    PHA03247
    Location:300 → 632
    PHA03247; large tegument protein UL36; Provisional
    cd16990
    Location:19 → 142
    ENTH_Epsin; Epsin N-Terminal Homology (ENTH) domain of Epsin family

  3. XM_042967251.1 → XP_042823185.1  epsin-3 isoform X1

    Conserved Domains (3) summary
    smart00726
    Location:228 → 247
    UIM; Ubiquitin-interacting motif
    PHA03247
    Location:300 → 632
    PHA03247; large tegument protein UL36; Provisional
    cd16990
    Location:19 → 142
    ENTH_Epsin; Epsin N-Terminal Homology (ENTH) domain of Epsin family
Nucleotide Protein
Heading Accession and Version

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