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RHBDF2 rhomboid 5 homolog 2 [ Panthera tigris (tiger) ]

Gene ID: 102966965, updated on 10-Mar-2024

Summary

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Gene symbol
RHBDF2
Gene description
rhomboid 5 homolog 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: E1
Exon count:
21
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) E1 NC_056673.1 (56199771..56225045, complement)

Chromosome E1 - NC_056673.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 O Neighboring gene uncharacterized LOC122233430 Neighboring gene aralkylamine N-acetyltransferase Neighboring gene cytoglobin Neighboring gene photoreceptor disc component

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056673.1 Chromosome E1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of epidermal growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive rhomboid protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056673.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    56199771..56225045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042965978.1 → XP_042821912.1  inactive rhomboid protein 2

    Conserved Domains (3) summary
    pfam01694
    Location:619 → 760
    Rhomboid; Rhomboid family
    pfam12595
    Location:99 → 304
    Rhomboid_SP; Rhomboid serine protease
    cl28910
    Location:720 → 810
    MFS; Major Facilitator Superfamily

  2. XM_042965979.1 → XP_042821913.1  inactive rhomboid protein 2

    Conserved Domains (3) summary
    pfam01694
    Location:619 → 760
    Rhomboid; Rhomboid family
    pfam12595
    Location:99 → 304
    Rhomboid_SP; Rhomboid serine protease
    cl28910
    Location:720 → 810
    MFS; Major Facilitator Superfamily

  3. XM_042965980.1 → XP_042821914.1  inactive rhomboid protein 2

    Conserved Domains (3) summary
    pfam01694
    Location:619 → 760
    Rhomboid; Rhomboid family
    pfam12595
    Location:99 → 304
    Rhomboid_SP; Rhomboid serine protease
    cl28910
    Location:720 → 810
    MFS; Major Facilitator Superfamily

  4. XM_042965981.1 → XP_042821915.1  inactive rhomboid protein 2

    Conserved Domains (3) summary
    pfam01694
    Location:619 → 760
    Rhomboid; Rhomboid family
    pfam12595
    Location:99 → 304
    Rhomboid_SP; Rhomboid serine protease
    cl28910
    Location:720 → 810
    MFS; Major Facilitator Superfamily
Nucleotide Protein
Heading Accession and Version

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