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SNX3 sorting nexin 3 [ Panthera tigris (tiger) ]

Gene ID: 102962221, updated on 10-Mar-2024

Summary

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Gene symbol
SNX3
Gene description
sorting nexin 3
See related
Ensembl:ENSPTIG00000011144
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: B2
Exon count:
4
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) B2 NC_056664.1 (96891390..96941180, complement)

Chromosome B2 - NC_056664.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122238703 Neighboring gene nuclear receptor subfamily 2 group E member 1 Neighboring gene U6 spliceosomal RNA Neighboring gene AFG1 like ATPase Neighboring gene small nucleolar RNA SNORA70 Neighboring gene uncharacterized LOC122238422

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056664.1 Chromosome B2 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of retromer complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056664.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    96891390..96941180 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042986920.1 → XP_042842854.1  sorting nexin-3

    UniProtKB/TrEMBL
    A0A8C9JP47
    Conserved Domains (1) summary
    cd07293
    Location:28 → 150
    PX_SNX3; The phosphoinositide binding Phox Homology domain of Sorting Nexin 3
Nucleotide Protein
Heading Accession and Version

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