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RAD54L2 RAD54 like 2 [ Panthera tigris (tiger) ]

Gene ID: 102955020, updated on 10-Mar-2024

Summary

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Gene symbol
RAD54L2
Gene description
RAD54 like 2
See related
Ensembl:ENSPTIG00000002240
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: A2
Exon count:
26
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) A2 NC_056661.1 (20259656..20377518)

Chromosome A2 - NC_056661.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 15B Neighboring gene DDB1 and CUL4 associated factor 1 Neighboring gene uncharacterized LOC122236659 Neighboring gene ATP synthase subunit g, mitochondrial-like Neighboring gene SNRPN upstream reading frame protein-like Neighboring gene NHP2-like protein 1 Neighboring gene uncharacterized LOC122236660 Neighboring gene testis expressed 264, ER-phagy receptor Neighboring gene glutamate metabotropic receptor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056661.1 Chromosome A2 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
helicase ARIP4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056661.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    20259656..20377518
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042979049.1 → XP_042834983.1  helicase ARIP4

    UniProtKB/TrEMBL
    A0A8C9J0B5
    Conserved Domains (3) summary
    PHA03247
    Location:1112 → 1430
    PHA03247; large tegument protein UL36; Provisional
    COG0553
    Location:134 → 907
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:271 → 547
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4

  2. XM_042979046.1 → XP_042834980.1  helicase ARIP4

    UniProtKB/TrEMBL
    A0A8C9J0B5
    Conserved Domains (3) summary
    PHA03247
    Location:1112 → 1430
    PHA03247; large tegument protein UL36; Provisional
    COG0553
    Location:134 → 907
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:271 → 547
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4

  3. XM_042979042.1 → XP_042834976.1  helicase ARIP4

    UniProtKB/TrEMBL
    A0A8C9J0B5
    Conserved Domains (3) summary
    PHA03247
    Location:1112 → 1430
    PHA03247; large tegument protein UL36; Provisional
    COG0553
    Location:134 → 907
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:271 → 547
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4

  4. XM_042979045.1 → XP_042834979.1  helicase ARIP4

    UniProtKB/TrEMBL
    A0A8C9J0B5
    Conserved Domains (3) summary
    PHA03247
    Location:1112 → 1430
    PHA03247; large tegument protein UL36; Provisional
    COG0553
    Location:134 → 907
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:271 → 547
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4

  5. XM_042979047.1 → XP_042834981.1  helicase ARIP4

    UniProtKB/TrEMBL
    A0A8C9J0B5
    Conserved Domains (3) summary
    PHA03247
    Location:1112 → 1430
    PHA03247; large tegument protein UL36; Provisional
    COG0553
    Location:134 → 907
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:271 → 547
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4

  6. XM_042979043.1 → XP_042834977.1  helicase ARIP4

    UniProtKB/TrEMBL
    A0A8C9J0B5
    Conserved Domains (3) summary
    PHA03247
    Location:1112 → 1430
    PHA03247; large tegument protein UL36; Provisional
    COG0553
    Location:134 → 907
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:271 → 547
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4

  7. XM_042979044.1 → XP_042834978.1  helicase ARIP4

    UniProtKB/TrEMBL
    A0A8C9J0B5
    Conserved Domains (3) summary
    PHA03247
    Location:1112 → 1430
    PHA03247; large tegument protein UL36; Provisional
    COG0553
    Location:134 → 907
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:271 → 547
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4

  8. XM_042979048.1 → XP_042834982.1  helicase ARIP4

    UniProtKB/TrEMBL
    A0A8C9J0B5
    Conserved Domains (3) summary
    PHA03247
    Location:1112 → 1430
    PHA03247; large tegument protein UL36; Provisional
    COG0553
    Location:134 → 907
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:271 → 547
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4
Nucleotide Protein
Heading Accession and Version

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