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CD4 CD4 molecule [ Panthera tigris (tiger) ]

Gene ID: 102954103, updated on 10-Mar-2024

Summary

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Gene symbol
CD4
Gene description
CD4 molecule
See related
Ensembl:ENSPTIG00000006621
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See CD4 in Genome Data Viewer
Location:
chromosome: B4
Exon count:
11
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) B4 NC_056666.1 (41219727..41264218)

Chromosome B4 - NC_056666.1Genomic Context describing neighboring genes Neighboring gene lymphocyte activating 3 Neighboring gene uncharacterized LOC122240586 Neighboring gene 40S ribosomal protein S27-like Neighboring gene G protein-coupled receptor 162 Neighboring gene prolyl 3-hydroxylase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056666.1 Chromosome B4 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MHC class II protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables coreceptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interleukin-15-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-cell surface glycoprotein CD4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056666.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    41219727..41264218
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007089599.2 → XP_007089661.2  T-cell surface glycoprotein CD4

    UniProtKB/TrEMBL
    A0A8C9J7Y6
    Conserved Domains (2) summary
    smart00406
    Location:37 → 113
    IGv; Immunoglobulin V-Type
    smart00409
    Location:152 → 217
    IG; Immunoglobulin
Nucleotide Protein
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