U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TCAF1 TRPM8 channel associated factor 1 [ Panthera tigris (tiger) ]

Gene ID: 102951597, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TCAF1
Gene description
TRPM8 channel associated factor 1
See related
Ensembl:ENSPTIG00000008385
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: A2
Exon count:
11
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) A2 NC_056661.1 (156006871..156047584, complement)

Chromosome A2 - NC_056661.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 10AC1 Neighboring gene uncharacterized LOC122235361 Neighboring gene TRPM8 channel associated factor 2 Neighboring gene uncharacterized LOC122235358 Neighboring gene olfactory receptor-like protein OLF3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_056661.1 Chromosome A2 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of anion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
TRPM8 channel-associated factor 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056661.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    156006871..156047584 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042974169.1 → XP_042830103.1  TRPM8 channel-associated factor 1 isoform X1

    Conserved Domains (2) summary
    pfam13402
    Location:633 → 889
    Peptidase_M60; Peptidase M60, enhancin and enhancin-like
    pfam17291
    Location:522 → 631
    M60-like_N; N-terminal domain of M60-like peptidases

  2. XM_042974165.1 → XP_042830099.1  TRPM8 channel-associated factor 1 isoform X1

    Conserved Domains (2) summary
    pfam13402
    Location:633 → 889
    Peptidase_M60; Peptidase M60, enhancin and enhancin-like
    pfam17291
    Location:522 → 631
    M60-like_N; N-terminal domain of M60-like peptidases

  3. XM_042974174.1 → XP_042830108.1  TRPM8 channel-associated factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C9JE46
    Conserved Domains (2) summary
    pfam13402
    Location:633 → 889
    Peptidase_M60; Peptidase M60, enhancin and enhancin-like
    pfam17291
    Location:522 → 631
    M60-like_N; N-terminal domain of M60-like peptidases

  4. XM_042974182.1 → XP_042830116.1  TRPM8 channel-associated factor 1 isoform X1

    Conserved Domains (2) summary
    pfam13402
    Location:633 → 889
    Peptidase_M60; Peptidase M60, enhancin and enhancin-like
    pfam17291
    Location:522 → 631
    M60-like_N; N-terminal domain of M60-like peptidases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.