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BOC BOC cell adhesion associated, oncogene regulated [ Panthera tigris (tiger) ]

Gene ID: 102950567, updated on 10-Mar-2024

Summary

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Gene symbol
BOC
Gene description
BOC cell adhesion associated, oncogene regulated
See related
Ensembl:ENSPTIG00000021941
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See BOC in Genome Data Viewer
Location:
chromosome: C2
Exon count:
23
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) C2 NC_056668.1 (59045119..59117916)

Chromosome C2 - NC_056668.1Genomic Context describing neighboring genes Neighboring gene nucleolus and neural progenitor protein Neighboring gene uncharacterized LOC122241963 Neighboring gene cilia and flagella associated protein 44 Neighboring gene spindle and centriole associated protein 1 Neighboring gene SID1 transmembrane family member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056668.1 Chromosome C2 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
brother of CDO

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056668.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    59045119..59117916
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042998758.1 → XP_042854692.1  brother of CDO isoform X1

    UniProtKB/TrEMBL
    A0A8C9L480
    Conserved Domains (5) summary
    smart00408
    Location:241 → 302
    IGc2; Immunoglobulin C-2 Type
    smart00060
    Location:470 → 555
    FN3; Fibronectin type 3 domain
    smart00409
    Location:133 → 208
    IG; Immunoglobulin
    cd00063
    Location:603 → 694
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:244 → 248
    Ig; Ig strand B [structural motif]

  2. XM_042998760.1 → XP_042854694.1  brother of CDO isoform X1

    UniProtKB/TrEMBL
    A0A8C9L480
    Conserved Domains (5) summary
    smart00408
    Location:241 → 302
    IGc2; Immunoglobulin C-2 Type
    smart00060
    Location:470 → 555
    FN3; Fibronectin type 3 domain
    smart00409
    Location:133 → 208
    IG; Immunoglobulin
    cd00063
    Location:603 → 694
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:244 → 248
    Ig; Ig strand B [structural motif]

  3. XM_042998757.1 → XP_042854691.1  brother of CDO isoform X1

    UniProtKB/TrEMBL
    A0A8C9L480
    Conserved Domains (5) summary
    smart00408
    Location:241 → 302
    IGc2; Immunoglobulin C-2 Type
    smart00060
    Location:470 → 555
    FN3; Fibronectin type 3 domain
    smart00409
    Location:133 → 208
    IG; Immunoglobulin
    cd00063
    Location:603 → 694
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:244 → 248
    Ig; Ig strand B [structural motif]

  4. XM_042998763.1 → XP_042854697.1  brother of CDO isoform X2

    UniProtKB/TrEMBL
    A0A8C9L480
    Conserved Domains (5) summary
    smart00408
    Location:241 → 302
    IGc2; Immunoglobulin C-2 Type
    smart00060
    Location:482 → 554
    FN3; Fibronectin type 3 domain
    smart00409
    Location:133 → 208
    IG; Immunoglobulin
    cd00063
    Location:602 → 693
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:244 → 248
    Ig; Ig strand B [structural motif]

  5. XM_042998764.1 → XP_042854698.1  brother of CDO isoform X3

    Conserved Domains (5) summary
    smart00408
    Location:241 → 302
    IGc2; Immunoglobulin C-2 Type
    smart00060
    Location:482 → 555
    FN3; Fibronectin type 3 domain
    smart00410
    Location:133 → 208
    IG_like; Immunoglobulin like
    cd00063
    Location:603 → 672
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:244 → 248
    Ig; Ig strand B [structural motif]

  6. XM_042998759.1 → XP_042854693.1  brother of CDO isoform X1

    UniProtKB/TrEMBL
    A0A8C9L480
    Conserved Domains (5) summary
    smart00408
    Location:241 → 302
    IGc2; Immunoglobulin C-2 Type
    smart00060
    Location:470 → 555
    FN3; Fibronectin type 3 domain
    smart00409
    Location:133 → 208
    IG; Immunoglobulin
    cd00063
    Location:603 → 694
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:244 → 248
    Ig; Ig strand B [structural motif]

  7. XM_042998762.1 → XP_042854696.1  brother of CDO isoform X1

    UniProtKB/TrEMBL
    A0A8C9L480
    Conserved Domains (5) summary
    smart00408
    Location:241 → 302
    IGc2; Immunoglobulin C-2 Type
    smart00060
    Location:470 → 555
    FN3; Fibronectin type 3 domain
    smart00409
    Location:133 → 208
    IG; Immunoglobulin
    cd00063
    Location:603 → 694
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:244 → 248
    Ig; Ig strand B [structural motif]

  8. XM_042998761.1 → XP_042854695.1  brother of CDO isoform X1

    UniProtKB/TrEMBL
    A0A8C9L480
    Conserved Domains (5) summary
    smart00408
    Location:241 → 302
    IGc2; Immunoglobulin C-2 Type
    smart00060
    Location:470 → 555
    FN3; Fibronectin type 3 domain
    smart00409
    Location:133 → 208
    IG; Immunoglobulin
    cd00063
    Location:603 → 694
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:244 → 248
    Ig; Ig strand B [structural motif]
Nucleotide Protein
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