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SOD2 superoxide dismutase 2 [ Panthera tigris (tiger) ]

Gene ID: 102950357, updated on 10-Mar-2024

Summary

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Gene symbol
SOD2
Gene description
superoxide dismutase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: B2
Exon count:
5
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) B2 NC_056664.1 (142709997..142721433, complement)

Chromosome B2 - NC_056664.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102960702 Neighboring gene uncharacterized LOC102960897 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene WT1 associated protein Neighboring gene CST complex subunit TEN1-like Neighboring gene acetyl-CoA acetyltransferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056664.1 Chromosome B2 Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables superoxide dismutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in superoxide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
superoxide dismutase [Mn], mitochondrial
Names
superoxide dismutase 2, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056664.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    142709997..142721433 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042987451.1 → XP_042843385.1  superoxide dismutase [Mn], mitochondrial

    Conserved Domains (1) summary
    COG0605
    Location:23 → 222
    SodA; Superoxide dismutase [Inorganic ion transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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