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LOC102947810 interferon-induced transmembrane protein 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102947810, updated on 6-Feb-2024

Summary

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Gene symbol
LOC102947810
Gene description
interferon-induced transmembrane protein 1
Locus tag
UY3_04126
See related
EnsemblRapid:ENSCMYG00015018467
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Also known as
IFITM3
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Genomic context

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See LOC102947810 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 6 NC_051246.2 (21097570..21100487, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 5 NC_051245.1 (21097575..21100456, complement)

Chromosome 6 - NC_051246.2Genomic Context describing neighboring genes Neighboring gene dispanin subfamily A member 2b Neighboring gene dispanin subfamily A member 2b Neighboring gene uncharacterized LOC119566389 Neighboring gene uncharacterized LOC122466217 Neighboring gene U2 spliceosomal RNA Neighboring gene beta-1,4-N-acetyl-galactosaminyltransferase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of viral entry into host cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of viral genome replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to interferon-alpha IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to interferon-beta IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to type II interferon IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in type I interferon-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon-induced transmembrane protein 1
Names
interferon induced transmembrane protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051246.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    21097570..21100487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007056746.4 → XP_007056808.1  interferon-induced transmembrane protein 1

    See identical proteins and their annotated locations for XP_007056808.1

    UniProtKB/TrEMBL
    M7BSB3
    Related
    ENSCMYP00015028544.1, ENSCMYT00015034757.1
    Conserved Domains (1) summary
    pfam04505
    Location:46 → 109
    CD225; Interferon-induced transmembrane protein
Nucleotide Protein
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