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DNER delta/notch like EGF repeat containing [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102947428, updated on 10-Mar-2024

Summary

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Gene symbol
DNER
Gene description
delta/notch like EGF repeat containing
Locus tag
UY3_02491
See related
EnsemblRapid:ENSCMYG00015020582
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See DNER in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 9 NC_057855.1 (32915061..33184395)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 9 NC_051249.1 (32915081..33183777)

Chromosome 9 - NC_057855.1Genomic Context describing neighboring genes Neighboring gene F-box protein 36 Neighboring gene thyroid hormone receptor interactor 12 Neighboring gene uncharacterized LOC122461593 Neighboring gene uncharacterized LOC122461699 Neighboring gene uncharacterized LOC122461700 Neighboring gene uncharacterized LOC122461705 Neighboring gene phosphotyrosine interaction domain containing 1 Neighboring gene uncharacterized LOC122461826

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in establishment or maintenance of epithelial cell apical/basal polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein-containing complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta and Notch-like epidermal growth factor-related receptor
Names
Delta and Notch-like epidermal growth factor-related receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057855.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    32915061..33184395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007055038.4 → XP_007055100.3  delta and Notch-like epidermal growth factor-related receptor

    Related
    ENSCMYP00015031380.1, ENSCMYT00015038760.1
    Conserved Domains (2) summary
    cd00054
    Location:572 → 608
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00008
    Location:344 → 378
    EGF; EGF-like domain
Nucleotide Protein
Heading Accession and Version

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