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RTEL1 regulator of telomere elongation helicase 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102947160, updated on 10-Mar-2024

Summary

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Gene symbol
RTEL1
Gene description
regulator of telomere elongation helicase 1
Locus tag
UY3_09614
See related
EnsemblRapid:ENSCMYG00015011005
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
42
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 13 NC_051253.2 (3922327..4042631)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 13 NC_051253.1 (38910791..39031064, complement)

Chromosome 13 - NC_051253.2Genomic Context describing neighboring genes Neighboring gene helicase with zinc finger 2 Neighboring gene glucocorticoid modulatory element binding protein 2 Neighboring gene stathmin 3 Neighboring gene uncharacterized LOC119567913 Neighboring gene TNF receptor superfamily member 6b Neighboring gene ADP ribosylation factor related protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA polymerase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA duplex unwinding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of t-circle formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomeric loop disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulator of telomere elongation helicase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051253.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    3922327..4042631
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043527143.1 → XP_043383078.1  regulator of telomere elongation helicase 1 isoform X8

    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  2. XM_037915529.2 → XP_037771457.1  regulator of telomere elongation helicase 1 isoform X1

    Conserved Domains (2) summary
    cd13932
    Location:908 → 1011
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

  3. XM_043527140.1 → XP_043383075.1  regulator of telomere elongation helicase 1 isoform X3

    Conserved Domains (2) summary
    cd13932
    Location:889 → 992
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

  4. XM_043527151.1 → XP_043383086.1  regulator of telomere elongation helicase 1 isoform X14

    UniProtKB/TrEMBL
    M7B823
    Related
    ENSCMYP00015017096.1, ENSCMYT00015020702.1
    Conserved Domains (2) summary
    cd13932
    Location:889 → 992
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

  5. XM_043527138.1 → XP_043383073.1  regulator of telomere elongation helicase 1 isoform X2

    Conserved Domains (2) summary
    cd13932
    Location:899 → 1002
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  6. XM_043527144.1 → XP_043383079.1  regulator of telomere elongation helicase 1 isoform X8

    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  7. XM_043527147.1 → XP_043383082.1  regulator of telomere elongation helicase 1 isoform X11

    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  8. XM_043527152.1 → XP_043383087.1  regulator of telomere elongation helicase 1 isoform X15

    UniProtKB/TrEMBL
    M7B823
    Related
    ENSCMYP00015017130.1, ENSCMYT00015020736.1
    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  9. XM_043527160.1 → XP_043383095.1  regulator of telomere elongation helicase 1 isoform X21

    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  10. XM_043527158.1 → XP_043383093.1  regulator of telomere elongation helicase 1 isoform X19

    Conserved Domains (2) summary
    cd13932
    Location:832 → 935
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 694
    rad3; DNA repair helicase (rad3)

  11. XM_043527157.1 → XP_043383092.1  regulator of telomere elongation helicase 1 isoform X17

    Conserved Domains (2) summary
    cd13932
    Location:855 → 958
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 717
    rad3; DNA repair helicase (rad3)

  12. XM_043527155.1 → XP_043383090.1  regulator of telomere elongation helicase 1 isoform X15

    UniProtKB/TrEMBL
    M7B823
    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  13. XM_043527159.1 → XP_043383094.1  regulator of telomere elongation helicase 1 isoform X20

    Related
    ENSCMYP00015017116.1, ENSCMYT00015020722.1
    Conserved Domains (2) summary
    cd13932
    Location:818 → 921
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 680
    rad3; DNA repair helicase (rad3)

  14. XM_043527139.1 → XP_043383074.1  regulator of telomere elongation helicase 1 isoform X2

    Conserved Domains (2) summary
    cd13932
    Location:899 → 1002
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  15. XM_043527149.1 → XP_043383084.1  regulator of telomere elongation helicase 1 isoform X11

    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  16. XM_043527154.1 → XP_043383089.1  regulator of telomere elongation helicase 1 isoform X15

    UniProtKB/TrEMBL
    M7B823
    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  17. XM_037915530.2 → XP_037771458.1  regulator of telomere elongation helicase 1 isoform X1

    Conserved Domains (2) summary
    cd13932
    Location:908 → 1011
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

  18. XM_043527153.1 → XP_043383088.1  regulator of telomere elongation helicase 1 isoform X15

    UniProtKB/TrEMBL
    M7B823
    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  19. XM_037915536.2 → XP_037771464.1  regulator of telomere elongation helicase 1 isoform X8

    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  20. XM_037915539.2 → XP_037771467.1  regulator of telomere elongation helicase 1 isoform X11

    Related
    ENSCMYP00015017162.1, ENSCMYT00015020768.1
    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  21. XM_037915532.2 → XP_037771460.1  regulator of telomere elongation helicase 1 isoform X3

    Conserved Domains (2) summary
    cd13932
    Location:889 → 992
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

  22. XM_037915527.2 → XP_037771455.1  regulator of telomere elongation helicase 1 isoform X1

    Conserved Domains (2) summary
    cd13932
    Location:908 → 1011
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

  23. XM_043527141.1 → XP_043383076.1  regulator of telomere elongation helicase 1 isoform X4

    Conserved Domains (2) summary
    cd13932
    Location:908 → 1011
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

  24. XM_037915537.2 → XP_037771465.1  regulator of telomere elongation helicase 1 isoform X9

    Conserved Domains (2) summary
    cd13932
    Location:908 → 1011
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

  25. XM_037915540.2 → XP_037771468.1  regulator of telomere elongation helicase 1 isoform X13

    Conserved Domains (2) summary
    cd13932
    Location:908 → 1011
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

  26. XM_043527156.1 → XP_043383091.1  regulator of telomere elongation helicase 1 isoform X16

    Conserved Domains (2) summary
    cd13932
    Location:908 → 1011
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

  27. XM_037915535.2 → XP_037771463.1  regulator of telomere elongation helicase 1 isoform X7

    Conserved Domains (2) summary
    cd13932
    Location:882 → 985
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 725
    rad3; DNA repair helicase (rad3)

  28. XM_037915534.2 → XP_037771462.1  regulator of telomere elongation helicase 1 isoform X6

    Conserved Domains (2) summary
    cd13932
    Location:883 → 986
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 726
    rad3; DNA repair helicase (rad3)

  29. XM_037915538.2 → XP_037771466.1  regulator of telomere elongation helicase 1 isoform X10

    Conserved Domains (2) summary
    cd13932
    Location:837 → 940
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 680
    rad3; DNA repair helicase (rad3)

  30. XM_043527142.1 → XP_043383077.1  regulator of telomere elongation helicase 1 isoform X5

    Conserved Domains (2) summary
    cd13932
    Location:886 → 989
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 729
    rad3; DNA repair helicase (rad3)

  31. XM_037915528.2 → XP_037771456.1  regulator of telomere elongation helicase 1 isoform X1

    Conserved Domains (2) summary
    cd13932
    Location:908 → 1011
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

  32. XM_043527145.1 → XP_043383080.1  regulator of telomere elongation helicase 1 isoform X8

    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  33. XM_043527146.1 → XP_043383081.1  regulator of telomere elongation helicase 1 isoform X8

    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  34. XM_043527148.1 → XP_043383083.1  regulator of telomere elongation helicase 1 isoform X11

    Conserved Domains (2) summary
    cd13932
    Location:880 → 983
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 742
    rad3; DNA repair helicase (rad3)

  35. XM_043527150.1 → XP_043383085.1  regulator of telomere elongation helicase 1 isoform X12

    Conserved Domains (2) summary
    cd13932
    Location:854 → 957
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 716
    rad3; DNA repair helicase (rad3)

  36. XM_037915541.2 → XP_037771469.1  regulator of telomere elongation helicase 1 isoform X18

    UniProtKB/TrEMBL
    M7B823
    Conserved Domains (2) summary
    cd13932
    Location:908 → 1011
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

  37. XM_037915543.2 → XP_037771471.1  regulator of telomere elongation helicase 1 isoform X22

    UniProtKB/TrEMBL
    M7B823
    Conserved Domains (2) summary
    cd13932
    Location:908 → 1011
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 751
    rad3; DNA repair helicase (rad3)

RNA

  1. XR_005227839.2 RNA Sequence

  2. XR_005227840.1 RNA Sequence

  3. XR_005227841.1 RNA Sequence

Nucleotide Protein
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