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STIM2 stromal interaction molecule 2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102945944, updated on 10-Mar-2024

Summary

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Gene symbol
STIM2
Gene description
stromal interaction molecule 2
Locus tag
UY3_05419
See related
EnsemblRapid:ENSCMYG00015009515
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 4 NC_057852.1 (105459293..105603627, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 4 NC_051244.1 (105460920..105603618, complement)

Chromosome 4 - NC_057852.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122465554 Neighboring gene uncharacterized LOC119566137 Neighboring gene uncharacterized LOC114019105 Neighboring gene uncharacterized LOC114019106 Neighboring gene TBC1 domain family member 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of store-operated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in store-operated calcium entry IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stromal interaction molecule 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057852.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    105459293..105603627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037897965.2 → XP_037753893.1  stromal interaction molecule 2 isoform X1

    Related
    ENSCMYP00015014659.1, ENSCMYT00015017766.1
    Conserved Domains (3) summary
    cd09574
    Location:188 → 261
    SAM_STIM2; SAM domain of STIM2 subfamily proteins
    COG1196
    Location:294 → 479
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam16533
    Location:404 → 501
    SOAR; STIM1 Orai1-activating region

  2. XM_037897966.2 → XP_037753894.1  stromal interaction molecule 2 isoform X2

    Related
    ENSCMYP00015014664.1, ENSCMYT00015017774.1
    Conserved Domains (3) summary
    cd09574
    Location:144 → 217
    SAM_STIM2; SAM domain of STIM2 subfamily proteins
    COG1196
    Location:250 → 435
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam16533
    Location:360 → 457
    SOAR; STIM1 Orai1-activating region

  3. XM_043544560.1 → XP_043400495.1  stromal interaction molecule 2 isoform X3

    Conserved Domains (3) summary
    cd09574
    Location:188 → 261
    SAM_STIM2; SAM domain of STIM2 subfamily proteins
    PRK00409
    Location:306 → 396
    PRK00409; recombination and DNA strand exchange inhibitor protein; Reviewed
    cl17033
    Location:407 → 439
    SOAR; STIM1 Orai1-activating region
Nucleotide Protein
Heading Accession and Version

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