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LGALS1 galectin 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102943061, updated on 10-Mar-2024

Summary

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Gene symbol
LGALS1
Gene description
galectin 1
Locus tag
UY3_09689
See related
EnsemblRapid:ENSCMYG00015025106
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Also known as
Galectin-1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 1 NC_057849.1 (254924420..254928833)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 1 NC_051241.1 (254924452..254928833)

Chromosome 1 - NC_057849.1Genomic Context describing neighboring genes Neighboring gene SH3 domain binding protein 1 Neighboring gene pyridoxal phosphatase Neighboring gene urotensin-2 receptor-like Neighboring gene arf-GAP with dual PH domain-containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables laminin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galectin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057849.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    254924420..254928833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037881151.2 → XP_037737079.1  galectin-1

    Related
    ENSCMYP00015038310.1, ENSCMYT00015047218.1
    Conserved Domains (1) summary
    smart00276
    Location:11 → 135
    GLECT; Galectin
Nucleotide Protein
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