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LGR4 leucine rich repeat containing G protein-coupled receptor 4 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102942862, updated on 10-Mar-2024

Summary

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Gene symbol
LGR4
Gene description
leucine rich repeat containing G protein-coupled receptor 4
Locus tag
UY3_14764
See related
EnsemblRapid:ENSCMYG00015009307
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
19
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 6 NC_051246.2 (46004450..46124029)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 5 NC_051245.1 (46004464..46124029)

Chromosome 6 - NC_051246.2Genomic Context describing neighboring genes Neighboring gene brain derived neurotrophic factor Neighboring gene lin-7 homolog C, crumbs cell polarity complex component Neighboring gene coiled-coil domain containing 34 Neighboring gene gamma-butyrobetaine hydroxylase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-hormone receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing G-protein coupled receptor 4
Names
Leucine-rich repeat-containing G-protein coupled receptor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051246.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    46004450..46124029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027830103.3 → XP_027685904.1  leucine-rich repeat-containing G-protein coupled receptor 4 isoform X2

    UniProtKB/TrEMBL
    M7AYE1

  2. XM_007067917.4 → XP_007067979.1  leucine-rich repeat-containing G-protein coupled receptor 4 isoform X1

    UniProtKB/TrEMBL
    M7AYE1
    Related
    ENSCMYP00015014340.1, ENSCMYT00015017411.1
    Conserved Domains (5) summary
    smart00013
    Location:28 → 57
    LRRNT; Leucine rich repeat N-terminal domain
    cd00116
    Location:83 → 456
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:62 → 82
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00001
    Location:557 → 802
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    pfam13855
    Location:177 → 237
    LRR_8; Leucine rich repeat

  3. XM_043549574.1 → XP_043405509.1  leucine-rich repeat-containing G-protein coupled receptor 4 isoform X3

    UniProtKB/TrEMBL
    M7AYE1
    Related
    ENSCMYP00015014331.1, ENSCMYT00015017402.1
    Conserved Domains (3) summary
    sd00033
    Location:9 → 28
    LRR_RI; leucine-rich repeat [structural motif]
    cd15361
    Location:486 → 759
    7tmA_LGR4; leucine-rich repeats-containing G protein-coupled receptor 4, member of the class A family of seven-transmembrane G protein-coupled receptors
    NF033189
    Location:51 → 409
    internalin_A; class 1 internalin InlA
Nucleotide Protein
Heading Accession and Version

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