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DNAI7 dynein axonemal intermediate chain 7 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102940921, updated on 10-Mar-2024

Summary

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Gene symbol
DNAI7
Gene description
dynein axonemal intermediate chain 7
Locus tag
UY3_17929
See related
EnsemblRapid:ENSCMYG00015014388
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Also known as
CASC1; CFAP94
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
23
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 1 NC_057849.1 (229502231..229559412)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 1 NC_051241.1 (229515738..229557396)

Chromosome 1 - NC_057849.1Genomic Context describing neighboring genes Neighboring gene lamin tail domain containing 1 Neighboring gene uncharacterized LOC122464151 Neighboring gene uncharacterized LOC114022234 Neighboring gene KRAS proto-oncogene, GTPase Neighboring gene electron transfer flavoprotein regulatory factor 1 Neighboring gene inositol 1,4,5-triphosphate receptor associated 2 Neighboring gene spexin hormone Neighboring gene glycogen synthase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dynein axonemal intermediate chain 7
Names
Cancer susceptibility candidate protein 1
cancer susceptibility 1
cancer susceptibility candidate 1
cilia and flagella associated protein 94

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057849.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    229502231..229559412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043538651.1 → XP_043394586.1  dynein axonemal intermediate chain 7 isoform X8

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:400 → 560
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:1 → 126
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  2. XM_043538672.1 → XP_043394607.1  dynein axonemal intermediate chain 7 isoform X8

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:400 → 560
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:1 → 126
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  3. XM_043538641.1 → XP_043394576.1  dynein axonemal intermediate chain 7 isoform X8

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:400 → 560
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:1 → 126
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  4. XM_043538675.1 → XP_043394610.1  dynein axonemal intermediate chain 7 isoform X8

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:400 → 560
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:1 → 126
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  5. XM_043538661.1 → XP_043394596.1  dynein axonemal intermediate chain 7 isoform X8

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:400 → 560
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:1 → 126
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  6. XM_043538627.1 → XP_043394562.1  dynein axonemal intermediate chain 7 isoform X7

    UniProtKB/TrEMBL
    M7B9X9
    Related
    ENSCMYP00015022256.1, ENSCMYT00015027017.1
    Conserved Domains (2) summary
    PTZ00266
    Location:1 → 74
    PTZ00266; NIMA-related protein kinase; Provisional
    pfam12366
    Location:409 → 569
    Casc1; Cancer susceptibility candidate 1

  7. XM_043538665.1 → XP_043394600.1  dynein axonemal intermediate chain 7 isoform X8

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:400 → 560
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:1 → 126
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  8. XM_043538618.1 → XP_043394553.1  dynein axonemal intermediate chain 7 isoform X5

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    PTZ00266
    Location:1 → 62
    PTZ00266; NIMA-related protein kinase; Provisional
    pfam12366
    Location:466 → 626
    Casc1; Cancer susceptibility candidate 1

  9. XM_037915445.2 → XP_037771373.1  dynein axonemal intermediate chain 7 isoform X1

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:529 → 689
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:9 → 255
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  10. XM_037915457.2 → XP_037771385.1  dynein axonemal intermediate chain 7 isoform X3

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:500 → 660
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:18 → 226
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  11. XM_043538629.1 → XP_043394564.1  dynein axonemal intermediate chain 7 isoform X8

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:400 → 560
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:1 → 126
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  12. XM_037915452.1 → XP_037771380.1  dynein axonemal intermediate chain 7 isoform X2

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:507 → 667
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:25 → 233
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  13. XM_043538624.1 → XP_043394559.1  dynein axonemal intermediate chain 7 isoform X6

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    PTZ00266
    Location:9 → 81
    PTZ00266; NIMA-related protein kinase; Provisional
    pfam12366
    Location:416 → 576
    Casc1; Cancer susceptibility candidate 1

  14. XM_037915466.1 → XP_037771394.1  dynein axonemal intermediate chain 7 isoform X4

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:473 → 633
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:16 → 199
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  15. XM_043538683.1 → XP_043394618.1  dynein axonemal intermediate chain 7 isoform X9

    UniProtKB/TrEMBL
    M7B9X9
    Related
    ENSCMYP00015022258.1, ENSCMYT00015027021.1
    Conserved Domains (2) summary
    PTZ00266
    Location:9 → 69
    PTZ00266; NIMA-related protein kinase; Provisional
    pfam12366
    Location:382 → 542
    Casc1; Cancer susceptibility candidate 1

  16. XM_043538655.1 → XP_043394590.1  dynein axonemal intermediate chain 7 isoform X8

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:400 → 560
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:1 → 126
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  17. XM_043538634.1 → XP_043394569.1  dynein axonemal intermediate chain 7 isoform X8

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:400 → 560
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:1 → 126
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  18. XM_043538644.1 → XP_043394579.1  dynein axonemal intermediate chain 7 isoform X8

    UniProtKB/TrEMBL
    M7B9X9
    Conserved Domains (2) summary
    pfam12366
    Location:400 → 560
    Casc1; Cancer susceptibility candidate 1
    pfam15927
    Location:1 → 126
    Casc1_N; Cancer susceptibility candidate 1 N-terminus
Nucleotide Protein
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