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SEMA4B semaphorin 4B [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102940227, updated on 10-Mar-2024

Summary

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Gene symbol
SEMA4B
Gene description
semaphorin 4B
Locus tag
UY3_06793
See related
EnsemblRapid:ENSCMYG00015001245
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 10 NC_051250.2 (82955695..83009378)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 10 NC_051250.1 (1059950..1098381, complement)

Chromosome 10 - NC_051250.2Genomic Context describing neighboring genes Neighboring gene zinc finger protein 710 Neighboring gene isocitrate dehydrogenase (NADP(+)) 2 Neighboring gene tubulin polyglutamylase TTLL13 Neighboring gene calcium and integrin binding 1 Neighboring gene GDP-D-glucose phosphorylase 1 Neighboring gene neugrin, neurite outgrowth associated

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemorepellent activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of axon extension involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
semaphorin-4B
Names
Semaphorin-4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051250.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    82955695..83009378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037910331.2 → XP_037766259.1  semaphorin-4B isoform X1

    Related
    ENSCMYP00015001882.1, ENSCMYT00015002284.1
    Conserved Domains (3) summary
    pfam01437
    Location:504 → 552
    PSI; Plexin repeat
    cd05872
    Location:579 → 660
    Ig_Sema4B_like; Immunoglobulin (Ig)-like domain of the class IV semaphorin Sema4B
    cl15693
    Location:44 → 503
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

  2. XM_043523461.1 → XP_043379396.1  semaphorin-4B isoform X2

    Conserved Domains (2) summary
    smart00423
    Location:504 → 531
    PSI; domain found in Plexins, Semaphorins and Integrins
    cl15693
    Location:44 → 503
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
Nucleotide Protein
Heading Accession and Version

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