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HSPBAP1 HSPB1 associated protein 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102935867, updated on 10-Mar-2024

Summary

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Gene symbol
HSPBAP1
Gene description
HSPB1 associated protein 1
Locus tag
UY3_18615
See related
EnsemblRapid:ENSCMYG00015016787
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 11 NC_051251.2 (10206471..10269401, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 11 NC_051251.1 (69252895..69315827)

Chromosome 11 - NC_051251.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 15 member 2 Neighboring gene uncharacterized LOC122462290 Neighboring gene solute carrier family 49 member 4 Neighboring gene semaphorin 5B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2-oxoglutarate-dependent dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
HSPB1-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051251.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    10206471..10269401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027834103.3 → XP_027689904.2  HSPB1-associated protein 1 isoform X2

    UniProtKB/TrEMBL
    M7B802
    Related
    ENSCMYP00015025704.1, ENSCMYT00015031537.1
    Conserved Domains (1) summary
    pfam13621
    Location:25 → 264
    Cupin_8; Cupin-like domain

  2. XM_037912516.2 → XP_037768444.1  HSPB1-associated protein 1 isoform X4

    UniProtKB/TrEMBL
    M7B802
    Conserved Domains (1) summary
    pfam13621
    Location:78 → 202
    Cupin_8; Cupin-like domain

  3. XM_037912517.2 → XP_037768445.1  HSPB1-associated protein 1 isoform X5

    Conserved Domains (1) summary
    cl40423
    Location:146 → 170
    cupin_RmlC-like; RmlC-like cupin superfamily

  4. XM_037912515.2 → XP_037768443.1  HSPB1-associated protein 1 isoform X3

    UniProtKB/TrEMBL
    M7B802
    Related
    ENSCMYP00015025697.1, ENSCMYT00015031530.1
    Conserved Domains (1) summary
    pfam13621
    Location:34 → 273
    Cupin_8; Cupin-like domain

  5. XM_037912514.2 → XP_037768442.1  HSPB1-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    M7B802
    Related
    ENSCMYP00015025700.1, ENSCMYT00015031533.1
    Conserved Domains (1) summary
    pfam13621
    Location:34 → 273
    Cupin_8; Cupin-like domain
Nucleotide Protein
Heading Accession and Version

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