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NEBL nebulette [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102935230, updated on 10-Mar-2024

Summary

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Gene symbol
NEBL
Gene description
nebulette
See related
EnsemblRapid:ENSCMYG00015025125 EnsemblRapid:ENSCMYG00015025129
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
32
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 2 NC_057850.1 (224865008..225244949, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 2 NC_051242.1 (224865248..225244635, complement)

Chromosome 2 - NC_057850.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122464746 Neighboring gene MAM and LDL receptor class A domain containing 1 Neighboring gene plexin domain containing 2 Neighboring gene uncharacterized LOC114019188 Neighboring gene SKI/DACH domain containing 1 Neighboring gene MLLT10 histone lysine methyltransferase DOT1L cofactor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiac muscle thin filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nebulette

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057850.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    224865008..225244949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037890826.2 → XP_037746754.1  nebulette isoform X11

    Related
    ENSCMYP00015038345.1, ENSCMYT00015047253.1
    Conserved Domains (4) summary
    smart00227
    Location:98 → 128
    NEBU; The Nebulin repeat is present also in Las1
    cd09447
    Location:5 → 57
    LIM_LASP; The LIM domain of LIM and SH3 Protein (LASP)
    pfam00880
    Location:67 → 94
    Nebulin; Nebulin repeat
    cl17036
    Location:216 → 273
    SH3; Src Homology 3 domain superfamily

  2. XM_043541304.1 → XP_043397239.1  nebulette isoform X10

    Conserved Domains (4) summary
    smart00227
    Location:98 → 128
    NEBU; The Nebulin repeat is present also in Las1
    cd09447
    Location:5 → 57
    LIM_LASP; The LIM domain of LIM and SH3 Protein (LASP)
    cd11935
    Location:247 → 304
    SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
    pfam00880
    Location:67 → 94
    Nebulin; Nebulin repeat

  3. XM_037890823.2 → XP_037746751.1  nebulette isoform X1

    Conserved Domains (3) summary
    smart00227
    Location:631 → 657
    NEBU; The Nebulin repeat is present also in Las1
    cd11935
    Location:955 → 1012
    SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
    pfam00880
    Location:763 → 790
    Nebulin; Nebulin repeat

  4. XM_037890825.2 → XP_037746753.1  nebulette isoform X7

    Conserved Domains (3) summary
    smart00227
    Location:557 → 583
    NEBU; The Nebulin repeat is present also in Las1
    cd11935
    Location:881 → 938
    SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
    pfam00880
    Location:689 → 716
    Nebulin; Nebulin repeat

  5. XM_043541298.1 → XP_043397233.1  nebulette isoform X2

    Conserved Domains (2) summary
    smart00227
    Location:722 → 751
    NEBU; The Nebulin repeat is present also in Las1
    cd11935
    Location:918 → 975
    SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)

  6. XM_043541299.1 → XP_043397234.1  nebulette isoform X4

    Conserved Domains (2) summary
    smart00227
    Location:722 → 751
    NEBU; The Nebulin repeat is present also in Las1
    cd11935
    Location:918 → 975
    SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)

  7. XM_043541301.1 → XP_043397236.1  nebulette isoform X6

    Conserved Domains (2) summary
    smart00227
    Location:685 → 714
    NEBU; The Nebulin repeat is present also in Las1
    cd11935
    Location:881 → 938
    SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)

  8. XM_037890824.2 → XP_037746752.1  nebulette isoform X3

    Conserved Domains (3) summary
    smart00227
    Location:594 → 620
    NEBU; The Nebulin repeat is present also in Las1
    cd11935
    Location:918 → 975
    SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
    pfam00880
    Location:726 → 753
    Nebulin; Nebulin repeat

  9. XM_043541302.1 → XP_043397237.1  nebulette isoform X8

    Conserved Domains (2) summary
    smart00227
    Location:759 → 788
    NEBU; The Nebulin repeat is present also in Las1
    cd11935
    Location:876 → 933
    SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)

  10. XM_043541300.1 → XP_043397235.1  nebulette isoform X5

    Conserved Domains (2) summary
    smart00227
    Location:759 → 788
    NEBU; The Nebulin repeat is present also in Las1
    cd11935
    Location:907 → 964
    SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)

  11. XM_043541303.1 → XP_043397238.1  nebulette isoform X9

    Related
    ENSCMYP00015038354.1, ENSCMYT00015047262.1
    Conserved Domains (1) summary
    smart00227
    Location:531 → 556
    NEBU; The Nebulin repeat is present also in Las1
Nucleotide Protein
Heading Accession and Version

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