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MAP7D1 MAP7 domain containing 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102932589, updated on 10-Mar-2024

Summary

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Gene symbol
MAP7D1
Gene description
MAP7 domain containing 1
See related
EnsemblRapid:ENSCMYG00015002070
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
18
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 19 NC_051259.2 (2789079..2826961, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 19 NC_051259.1 (16942952..16979850)

Chromosome 19 - NC_051259.2Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 40 Neighboring gene SH3 domain containing 21 Neighboring gene thyroid hormone receptor associated protein 3 Neighboring gene probable beta-D-xylosidase 7 Neighboring gene angiopoietin-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAP7 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051259.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    2789079..2826961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037881926.2 → XP_037737854.1  MAP7 domain-containing protein 1 isoform X2

    Conserved Domains (3) summary
    PTZ00121
    Location:331 → 438
    PTZ00121; MAEBL; Provisional
    PHA03247
    Location:516 → 716
    PHA03247; large tegument protein UL36; Provisional
    pfam05672
    Location:732 → 881
    MAP7; MAP7 (E-MAP-115) family

  2. XM_037881925.2 → XP_037737853.1  MAP7 domain-containing protein 1 isoform X1

    Related
    ENSCMYP00015003178.1, ENSCMYT00015003822.1
    Conserved Domains (3) summary
    PTZ00121
    Location:331 → 438
    PTZ00121; MAEBL; Provisional
    PHA03247
    Location:516 → 717
    PHA03247; large tegument protein UL36; Provisional
    pfam05672
    Location:733 → 882
    MAP7; MAP7 (E-MAP-115) family

  3. XM_037881927.2 → XP_037737855.1  MAP7 domain-containing protein 1 isoform X3

    Conserved Domains (3) summary
    PTZ00121
    Location:331 → 438
    PTZ00121; MAEBL; Provisional
    PTZ00108
    Location:381 → 641
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    pfam05672
    Location:696 → 845
    MAP7; MAP7 (E-MAP-115) family
Nucleotide Protein
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