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ATG4B autophagy related 4B cysteine peptidase [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102930660, updated on 10-Mar-2024

Summary

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Gene symbol
ATG4B
Gene description
autophagy related 4B cysteine peptidase
See related
EnsemblRapid:ENSCMYG00015020895
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See ATG4B in Genome Data Viewer
Location:
chromosome: 9
Exon count:
14
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 9 NC_057855.1 (54057668..54104165, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 9 NC_051249.1 (54058097..54104955, complement)

Chromosome 9 - NC_057855.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122461678 Neighboring gene D-2-hydroxyglutarate dehydrogenase Neighboring gene inhibitor of growth family member 5 Neighboring gene deoxythymidylate kinase Neighboring gene THAP domain containing 4 Neighboring gene BCL2 family apoptosis regulator BOK Neighboring gene serine/threonine kinase 25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-phosphatidylethanolamide deconjugating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine protease ATG4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057855.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    54057668..54104165 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043522452.1 → XP_043378387.1  cysteine protease ATG4B isoform X1

    Related
    ENSCMYP00015031868.1, ENSCMYT00015039298.1

  2. XM_043522453.1 → XP_043378388.1  cysteine protease ATG4B isoform X2

    Related
    ENSCMYP00015031858.1, ENSCMYT00015039276.1

  3. XM_043522454.1 → XP_043378389.1  cysteine protease ATG4B isoform X3

Nucleotide Protein
Heading Accession and Version

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