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CBLL1 Cbl proto-oncogene like 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102930370, updated on 10-Mar-2024

Summary

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Gene symbol
CBLL1
Gene description
Cbl proto-oncogene like 1
See related
EnsemblRapid:ENSCMYG00015004752
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See CBLL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 1 NC_057849.1 (319866121..319888172, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 1 NC_051241.1 (319866121..319881261, complement)

Chromosome 1 - NC_057849.1Genomic Context describing neighboring genes Neighboring gene dihydrolipoamide dehydrogenase Neighboring gene solute carrier family 26 member 3 Neighboring gene solute carrier family 26 member 4 Neighboring gene B cell receptor associated protein 29 Neighboring gene uncharacterized LOC122466624 Neighboring gene dihydrouridine synthase 4 like Neighboring gene component of oligomeric golgi complex 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase Hakai

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057849.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    319866121..319888172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027827997.3 → XP_027683798.2  E3 ubiquitin-protein ligase Hakai isoform X5

    Conserved Domains (2) summary
    cd16508
    Location:106 → 147
    RING-HC_HAKAI_like; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Hakai, zinc finger protein 645 (ZNF645), and similar proteins
    pfam18408
    Location:160 → 191
    zf_Hakai; C2H2 Hakai zinc finger domain

  2. XM_007065664.4 → XP_007065726.2  E3 ubiquitin-protein ligase Hakai isoform X4

    Related
    ENSCMYP00015007385.1, ENSCMYT00015008894.1
    Conserved Domains (2) summary
    cd16508
    Location:107 → 148
    RING-HC_HAKAI_like; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Hakai, zinc finger protein 645 (ZNF645), and similar proteins
    pfam18408
    Location:161 → 192
    zf_Hakai; C2H2 Hakai zinc finger domain

  3. XM_037889128.2 → XP_037745056.1  E3 ubiquitin-protein ligase Hakai isoform X6

    Conserved Domains (2) summary
    cd16508
    Location:60 → 101
    RING-HC_HAKAI_like; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Hakai, zinc finger protein 645 (ZNF645), and similar proteins
    pfam18408
    Location:114 → 145
    zf_Hakai; C2H2 Hakai zinc finger domain

  4. XM_043551513.1 → XP_043407448.1  E3 ubiquitin-protein ligase Hakai isoform X2

    Conserved Domains (1) summary
    cd16508
    Location:139 → 180
    RING-HC_HAKAI_like; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Hakai, zinc finger protein 645 (ZNF645), and similar proteins

  5. XM_043551508.1 → XP_043407443.1  E3 ubiquitin-protein ligase Hakai isoform X1

    Conserved Domains (1) summary
    cd16508
    Location:140 → 181
    RING-HC_HAKAI_like; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Hakai, zinc finger protein 645 (ZNF645), and similar proteins

  6. XM_037889129.2 → XP_037745057.1  E3 ubiquitin-protein ligase Hakai isoform X6

    Related
    ENSCMYP00015007365.1, ENSCMYT00015008863.1
    Conserved Domains (2) summary
    cd16508
    Location:60 → 101
    RING-HC_HAKAI_like; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Hakai, zinc finger protein 645 (ZNF645), and similar proteins
    pfam18408
    Location:114 → 145
    zf_Hakai; C2H2 Hakai zinc finger domain

  7. XM_027827996.3 → XP_027683797.2  E3 ubiquitin-protein ligase Hakai isoform X3

    Conserved Domains (2) summary
    cd16508
    Location:113 → 154
    RING-HC_HAKAI_like; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Hakai, zinc finger protein 645 (ZNF645), and similar proteins
    pfam18408
    Location:167 → 198
    zf_Hakai; C2H2 Hakai zinc finger domain
Nucleotide Protein
Heading Accession and Version

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