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Tuba4a tubulin alpha 4a [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102928867, updated on 10-Mar-2024

Summary

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Gene symbol
Tuba4a
Gene description
tubulin alpha 4a
See related
Ensembl:ENSPEMG00000023038
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human all
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Genomic context

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See Tuba4a in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 13 NC_056020.1 (36806570..36811390)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501055.1 (6388498..6392769)

Chromosome 13 - NC_056020.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type N Neighboring gene DnaJ heat shock protein family (Hsp40) member B2 Neighboring gene serine/threonine kinase 16 Neighboring gene galactosidase beta 1 like Neighboring gene ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin alpha-4A chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056020.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    36806570..36811390
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042260081.1 → XP_042116015.1  tubulin alpha-4A chain isoform X1

    UniProtKB/TrEMBL
    A0A8C8TNX9
    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 433
    PTZ00335; tubulin alpha chain; Provisional

  2. XM_006972157.3 → XP_006972219.1  tubulin alpha-4A chain isoform X2

    See identical proteins and their annotated locations for XP_006972219.1

    UniProtKB/TrEMBL
    A0A6I9L693, A0A8C8TNX9
    Related
    ENSPEMP00000027144.1
    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 448
    PTZ00335; tubulin alpha chain; Provisional
Nucleotide Protein
Heading Accession and Version

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