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Atg101 autophagy related 101 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102926623, updated on 10-Mar-2024

Summary

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Gene symbol
Atg101
Gene description
autophagy related 101
See related
Ensembl:ENSPEMG00000018832
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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See Atg101 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
3
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 20 NC_056027.1 (67748433..67756504)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501206.1 (2470105..2478170, complement)

Chromosome 20 - NC_056027.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121824327 Neighboring gene nuclear receptor subfamily 4 group A member 1 Neighboring gene small integral membrane protein 41 Neighboring gene uncharacterized LOC121824349 Neighboring gene keratin 80

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
autophagy-related protein 101

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056027.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    67748433..67756504
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006981893.2 → XP_006981955.1  autophagy-related protein 101

    UniProtKB/TrEMBL
    A0A6I9LMU6
    Related
    ENSPEMP00000021062.1, ENSPEMT00000025416.1
    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101
Nucleotide Protein
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