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Tmem129 transmembrane protein 129, E3 ubiquitin ligase [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102924910, updated on 10-Mar-2024

Summary

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Gene symbol
Tmem129
Gene description
transmembrane protein 129, E3 ubiquitin ligase
See related
Ensembl:ENSPEMG00000000690
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 10 NC_056017.1 (28061197..28066688, complement)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501063.1 (545861..550927)

Chromosome 10 - NC_056017.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 53 member A Neighboring gene stem-loop histone mRNA binding protein Neighboring gene transforming acidic coiled-coil containing protein 3 Neighboring gene fibroblast growth factor receptor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase TM129

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056017.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    28061197..28066688 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042285777.1 → XP_042141711.1  E3 ubiquitin-protein ligase TM129 isoform X1

    UniProtKB/TrEMBL
    A0A6I9KXP0
    Conserved Domains (1) summary
    pfam10272
    Location:17 → 359
    Tmpp129; Putative transmembrane protein precursor

  2. XM_006972888.3 → XP_006972950.1  E3 ubiquitin-protein ligase TM129 isoform X1

    UniProtKB/TrEMBL
    A0A6I9KXP0
    Related
    ENSPEMP00000000962.1
    Conserved Domains (1) summary
    pfam10272
    Location:17 → 359
    Tmpp129; Putative transmembrane protein precursor

  3. XM_042285778.1 → XP_042141712.1  E3 ubiquitin-protein ligase TM129 isoform X2

  4. XM_042285779.1 → XP_042141713.1  E3 ubiquitin-protein ligase TM129 isoform X3

    UniProtKB/TrEMBL
    A0A6J0CVI9
    Conserved Domains (1) summary
    pfam10272
    Location:1 → 288
    Tmpp129; Putative transmembrane protein precursor
Nucleotide Protein
Heading Accession and Version

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