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Abtb3 ankyrin repeat and BTB domain containing 3 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102919511, updated on 10-Mar-2024

Summary

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Gene symbol
Abtb3
Gene description
ankyrin repeat and BTB domain containing 3
See related
Ensembl:ENSPEMG00000019467
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Also known as
Btbd11
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
18
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 18 NC_056025.1 (2237112..2504084)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501352.1 (1651479..1917975, complement)

Chromosome 18 - NC_056025.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121823683 Neighboring gene mitochondrial transcription termination factor 2 Neighboring gene cryptochrome circadian regulator 1 Neighboring gene uncharacterized LOC121823652 Neighboring gene PWP1 homolog, endonuclein Neighboring gene PR/SET domain 4 Neighboring gene achaete-scute family bHLH transcription factor 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and BTB/POZ domain-containing protein BTBD11
Names
BTB (POZ) domain containing 11
BTB domain containing 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056025.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    2237112..2504084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042263134.1 → XP_042119068.1  ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X4

    Conserved Domains (3) summary
    COG5262
    Location:192 → 248
    HTA1; Histone H2A [Chromatin structure and dynamics]
    cd18351
    Location:724 → 854
    BTB_POZ_BTBD11; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 11 (BTBD11)
    cd18527
    Location:847 → 929
    BACK_BTBD11; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 11 (BTBD11)

  2. XM_016005496.2 → XP_015860982.1  ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X3

    UniProtKB/TrEMBL
    A0A6J0E6C1
    Conserved Domains (6) summary
    smart00225
    Location:813 → 910
    BTB; Broad-Complex, Tramtrack and Bric a brac
    cd00204
    Location:588 → 707
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00651
    Location:804 → 907
    BTB; BTB/POZ domain
    pfam13637
    Location:612 → 678
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:614 → 655
    ANK; ANK repeat [structural motif]
    cl23907
    Location:200 → 244
    H2A; Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two H2A, H2B, H3, and H4 subunits. The H2A subunit performs essential roles in maintaining structural integrity of the nucleosome, chromatin condensation, and binding ...

  3. XM_006986960.3 → XP_006987022.1  ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X1

    UniProtKB/TrEMBL
    A0A6I9LR79
    Conserved Domains (7) summary
    smart00225
    Location:932 → 1029
    BTB; Broad-Complex, Tramtrack and Bric a brac
    cd00204
    Location:606 → 759
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00651
    Location:923 → 1026
    BTB; BTB/POZ domain
    pfam12796
    Location:616 → 724
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:588 → 632
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:614 → 655
    ANK; ANK repeat [structural motif]
    cl23907
    Location:200 → 244
    H2A; Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two H2A, H2B, H3, and H4 subunits. The H2A subunit performs essential roles in maintaining structural integrity of the nucleosome, chromatin condensation, and binding ...

  4. XM_042263132.1 → XP_042119066.1  ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X2

    Conserved Domains (5) summary
    COG0666
    Location:611 → 696
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    COG5262
    Location:192 → 248
    HTA1; Histone H2A [Chromatin structure and dynamics]
    sd00045
    Location:631 → 657
    ANK; ANK repeat [structural motif]
    cd18351
    Location:843 → 973
    BTB_POZ_BTBD11; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 11 (BTBD11)
    cd18527
    Location:966 → 1048
    BACK_BTBD11; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 11 (BTBD11)

  5. XM_006986961.3 → XP_006987023.1  ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X5

    UniProtKB/TrEMBL
    A0A6I9LYM9
    Related
    ENSPEMP00000021969.1
    Conserved Domains (7) summary
    smart00225
    Location:460 → 557
    BTB; Broad-Complex, Tramtrack and Bric a brac
    cd00204
    Location:134 → 287
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00651
    Location:451 → 554
    BTB; BTB/POZ domain
    pfam12796
    Location:144 → 252
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:226 → 287
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:142 → 183
    ANK; ANK repeat [structural motif]
    cl06652
    Location:558 → 602
    BACK_like; BTB-And-C-terminal-Kelch (BACK) domain and similar domains
Nucleotide Protein
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