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LOC102919289 keratin, type II cytoskeletal 79 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102919289, updated on 16-Nov-2023

Summary

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Gene symbol
LOC102919289
Gene description
keratin, type II cytoskeletal 79
See related
Ensembl:ENSPEMG00000004401
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Also known as
Krt79
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Genomic context

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Location:
chromosome: 20
Exon count:
9
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 20 NC_056027.1 (68391879..68404941, complement)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501206.1 (1836462..1849530)

Chromosome 20 - NC_056027.1Genomic Context describing neighboring genes Neighboring gene keratin, type II cytoskeletal 3 Neighboring gene keratin, type II cytoskeletal 4 Neighboring gene keratin 78 Neighboring gene keratin 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of skin epidermis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratinization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
keratin, type II cytoskeletal 79
Names
keratin 79

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056027.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    68391879..68404941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006981869.1 → XP_006981931.1  keratin, type II cytoskeletal 79

    UniProtKB/TrEMBL
    A0A6I9LTH4
    Related
    ENSPEMP00000003190.1, ENSPEMT00000005327.1
    Conserved Domains (2) summary
    pfam00038
    Location:140 → 454
    Filament; Intermediate filament protein
    pfam16208
    Location:28 → 137
    Keratin_2_head; Keratin type II head
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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