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Zbtb4 zinc finger and BTB domain containing 4 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102916782, updated on 10-Mar-2024

Summary

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Gene symbol
Zbtb4
Gene description
zinc finger and BTB domain containing 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 8 NC_056015.1 (53897504..53904354)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501067.1 (605602..625672, complement)

Chromosome 8 - NC_056015.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member G6 Neighboring gene uncharacterized LOC121831334 Neighboring gene cholinergic receptor nicotinic beta 1 subunit Neighboring gene fibroblast growth factor 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056015.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    53897504..53904354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015992312.2 → XP_015847798.1  zinc finger and BTB domain-containing protein 4

    UniProtKB/TrEMBL
    A0A6I9L5I1
    Conserved Domains (5) summary
    smart00225
    Location:31 → 157
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:292 → 312
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:20 → 157
    BTB; BTB/POZ domain
    pfam13465
    Location:304 → 328
    zf-H2C2_2; Zinc-finger double domain
    pfam13913
    Location:216 → 238
    zf-C2HC_2; zinc-finger of a C2HC-type
Nucleotide Protein
Heading Accession and Version

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