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Rbm41 RNA binding motif protein 41 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102915812, updated on 10-Mar-2024

Summary

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Gene symbol
Rbm41
Gene description
RNA binding motif protein 41
See related
Ensembl:ENSPEMG00000015991
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) X NC_056031.1 (44248791..44315308)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501040.1 (4856848..4917279)

Chromosome X - NC_056031.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal assembly factor 6 Neighboring gene nucleoporin 62 C-terminal like Neighboring gene heterogeneous nuclear ribonucleoprotein A3-like Neighboring gene 60S ribosomal export protein NMD3-like Neighboring gene MORC family CW-type zinc finger 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U12 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pre-mRNA intronic binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U12-type spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein 41

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056031.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    44248791..44315308
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015992295.2 → XP_015847781.1  RNA-binding protein 41 isoform X1

    UniProtKB/TrEMBL
    A0A6J0CX57
    Related
    ENSPEMP00000016904.1
    Conserved Domains (1) summary
    cd12239
    Location:332 → 409
    RRM2_RBM40_like; RNA recognition motif 2 in RNA-binding protein 40 (RBM40) and similar proteins

  2. XM_006970315.3 → XP_006970377.1  RNA-binding protein 41 isoform X2

    UniProtKB/TrEMBL
    A0A6I9KTB1
    Related
    ENSPEMP00000016902.1
    Conserved Domains (1) summary
    cd12239
    Location:308 → 385
    RRM2_RBM40_like; RNA recognition motif 2 (RRM2) found in RNA-binding protein 40 (RBM40) and similar proteins
Nucleotide Protein
Heading Accession and Version

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