U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Snx14 sorting nexin 14 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102912785, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Snx14
Gene description
sorting nexin 14
See related
Ensembl:ENSPEMG00000009462
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 7
Exon count:
29
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 7 NC_056014.1 (73843736..73911582)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501243.1 (143475..211309)

Chromosome 7 - NC_056014.1Genomic Context describing neighboring genes Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene synaptotagmin binding cytoplasmic RNA interacting protein Neighboring gene uncharacterized LOC121830908 Neighboring gene 5'-nucleotidase ecto Neighboring gene fasciculation and elongation protein zeta-2-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sorting nexin-14

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056014.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    73843736..73911582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042281319.1 → XP_042137253.1  sorting nexin-14 isoform X3

    UniProtKB/TrEMBL
    A0A6J0DXU3
    Conserved Domains (4) summary
    cd06877
    Location:591 → 713
    PX_SNX14; The phosphoinositide binding Phox Homology domain of Sorting Nexin 14
    cd08722
    Location:367 → 493
    RGS_SNX14; Regulator of G protein signaling (RGS) domain found in the Sorting Nexin14 (SNX14) protein
    COG5391
    Location:603 → 838
    COG5391; Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only]
    cl02564
    Location:159 → 330
    PXA; PXA domain

  2. XM_042281320.1 → XP_042137254.1  sorting nexin-14 isoform X4

    UniProtKB/TrEMBL
    A0A6J0DXU3
    Conserved Domains (3) summary
    cd06877
    Location:582 → 704
    PX_SNX14; The phosphoinositide binding Phox Homology domain of Sorting Nexin 14
    cd08722
    Location:367 → 493
    RGS_SNX14; Regulator of G protein signaling (RGS) domain found in the Sorting Nexin14 (SNX14) protein
    cl02564
    Location:159 → 330
    PXA; PXA domain

  3. XM_006983705.3 → XP_006983767.1  sorting nexin-14 isoform X1

    UniProtKB/TrEMBL
    A0A6I9LRF8, A0A6J0DXU3
    Conserved Domains (4) summary
    cd06877
    Location:591 → 713
    PX_SNX14; The phosphoinositide binding Phox Homology domain of Sorting Nexin 14
    cd08722
    Location:367 → 493
    RGS_SNX14; Regulator of G protein signaling (RGS) domain found in the Sorting Nexin14 (SNX14) protein
    pfam02194
    Location:158 → 327
    PXA; PXA domain
    pfam08628
    Location:834 → 938
    Nexin_C; Sorting nexin C terminal

  4. XM_006983706.3 → XP_006983768.1  sorting nexin-14 isoform X2

    UniProtKB/TrEMBL
    A0A6I9LJ45, A0A6J0DXU3
    Related
    ENSPEMP00000007561.1
    Conserved Domains (4) summary
    cd06877
    Location:582 → 704
    PX_SNX14; The phosphoinositide binding Phox Homology domain of Sorting Nexin 14
    cd08722
    Location:367 → 493
    RGS_SNX14; Regulator of G protein signaling (RGS) domain found in the Sorting Nexin14 (SNX14) protein
    pfam02194
    Location:158 → 327
    PXA; PXA domain
    pfam08628
    Location:825 → 929
    Nexin_C; Sorting nexin C terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.