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Znf423 zinc finger protein 423 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102910814, updated on 10-Mar-2024

Summary

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Gene symbol
Znf423
Gene description
zinc finger protein 423
See related
Ensembl:ENSPEMG00000015523
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 5 NC_056012.1 (16912912..17216614)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501052.1 (2809433..3067396, complement)

Chromosome 5 - NC_056012.1Genomic Context describing neighboring genes Neighboring gene AP-3 complex subunit sigma-1 Neighboring gene uncharacterized LOC121829348 Neighboring gene uncharacterized LOC121829349 Neighboring gene chromosome 5 C16orf78 homolog Neighboring gene uncharacterized LOC121829350

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 423

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056012.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    16912912..17216614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042277351.1 → XP_042133285.1  zinc finger protein 423 isoform X1

    UniProtKB/TrEMBL
    A0A8C8TQA1, A0A8C8TSA7
    Conserved Domains (2) summary
    COG5048
    Location:202 → 603
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:148 → 168
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_042277352.1 → XP_042133286.1  zinc finger protein 423 isoform X2

    UniProtKB/TrEMBL
    A0A8C8TQA1
    Conserved Domains (2) summary
    COG5048
    Location:178 → 579
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:124 → 144
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_042277353.1 → XP_042133287.1  zinc finger protein 423 isoform X3

    UniProtKB/TrEMBL
    A0A8C8TQA1
    Conserved Domains (2) summary
    COG5048
    Location:77 → 478
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:23 → 43
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_016006638.2 → XP_015862124.2  zinc finger protein 423 isoform X3

    UniProtKB/TrEMBL
    A0A8C8TQA1
    Conserved Domains (2) summary
    COG5048
    Location:77 → 478
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:23 → 43
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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