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Tat tyrosine aminotransferase [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102908098, updated on 10-Mar-2024

Summary

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Gene symbol
Tat
Gene description
tyrosine aminotransferase
See related
Ensembl:ENSPEMG00000002277
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 5 NC_056012.1 (38460359..38471507)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501075.1 (5040628..5051713, complement)

Chromosome 5 - NC_056012.1Genomic Context describing neighboring genes Neighboring gene PH domain and leucine rich repeat protein phosphatase 2 Neighboring gene MARVEL domain containing 3 Neighboring gene carbohydrate sulfotransferase 4 Neighboring gene zinc finger protein 23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-tyrosine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aromatic amino acid family catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine aminotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056012.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    38460359..38471507
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006974113.3 → XP_006974175.1  tyrosine aminotransferase

    UniProtKB/TrEMBL
    A0A6I9L710
    Related
    ENSPEMP00000002260.1
    Conserved Domains (3) summary
    cd00609
    Location:74 → 436
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    TIGR01264
    Location:41 → 442
    tyr_amTase_E; tyrosine aminotransferase, eukaryotic
    pfam07706
    Location:1 → 40
    TAT_ubiq; Aminotransferase ubiquitination site
Nucleotide Protein
Heading Accession and Version

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