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Kctd10 potassium channel tetramerization domain containing 10 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102907189, updated on 10-Mar-2024

Summary

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Gene symbol
Kctd10
Gene description
potassium channel tetramerization domain containing 10
See related
Ensembl:ENSPEMG00000012159
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 23
Exon count:
10
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 23 NC_056030.1 (4650358..4675425, complement)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501735.1 (484226..507713)

Chromosome 23 - NC_056030.1Genomic Context describing neighboring genes Neighboring gene forkhead box N4 Neighboring gene myosin IH Neighboring gene ubiquitin protein ligase E3B Neighboring gene uncharacterized LOC121825476 Neighboring gene metabolism of cobalamin associated B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul3-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056030.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    4650358..4675425 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015987455.2 → XP_015842941.1  BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J0CJI1
    Related
    ENSPEMP00000011548.1
    Conserved Domains (2) summary
    smart00225
    Location:33 → 131
    BTB; Broad-Complex, Tramtrack and Bric a brac
    pfam02214
    Location:34 → 124
    BTB_2; BTB/POZ domain

  2. XM_006993945.3 → XP_006994007.1  BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A6I9M7S0
    Conserved Domains (2) summary
    smart00225
    Location:33 → 131
    BTB; Broad-Complex, Tramtrack and Bric a brac
    pfam02214
    Location:34 → 124
    BTB_2; BTB/POZ domain

  3. XM_042267802.1 → XP_042123736.1  BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 isoform X5

    Conserved Domains (1) summary
    cd18399
    Location:23 → 133
    BTB_POZ_KCTD10_BACURD3; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 10 (KCTD10)

  4. XM_042267800.1 → XP_042123734.1  BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 isoform X1

    Conserved Domains (1) summary
    cd18369
    Location:103 → 193
    BTB_POZ_KCTD10-like_BACURD; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing proteins, KCTD10 (BACURD3), KCTD13 (BACURD1), and TNFAIP1 (BACURD2)

  5. XM_042267801.1 → XP_042123735.1  BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 isoform X2

    Conserved Domains (1) summary
    cd18399
    Location:95 → 204
    BTB_POZ_KCTD10_BACURD3; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 10 (KCTD10)
Nucleotide Protein
Heading Accession and Version

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