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Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102905947, updated on 10-Mar-2024

Summary

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Gene symbol
Igf2bp1
Gene description
insulin like growth factor 2 mRNA binding protein 1
See related
Ensembl:ENSPEMG00000021974
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
15
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 8 NC_056015.1 (81177663..81221437, complement)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501053.1 (3706541..3756220)

Chromosome 8 - NC_056015.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121831440 Neighboring gene U6 spliceosomal RNA Neighboring gene gastric inhibitory polypeptide Neighboring gene SNF8 subunit of ESCRT-II

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
insulin-like growth factor 2 mRNA-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056015.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    81177663..81221437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016007883.2 → XP_015863369.1  insulin-like growth factor 2 mRNA-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6J0E8G1
    Conserved Domains (4) summary
    cd00105
    Location:279 → 344
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    cd12625
    Location:1 → 77
    RRM1_IGF2BP1; RNA recognition motif 1 in vertebrate insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)
    cd12628
    Location:81 → 156
    RRM2_IGF2BP1; RNA recognition motif 2 in vertebrate insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)
    pfam00013
    Location:198 → 262
    KH_1; KH domain

  2. XM_006971914.2 → XP_006971976.1  insulin-like growth factor 2 mRNA-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6I9L2N6
    Related
    ENSPEMP00000025594.1
    Conserved Domains (4) summary
    cd00105
    Location:279 → 344
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    cd12625
    Location:1 → 77
    RRM1_IGF2BP1; RNA recognition motif 1 in vertebrate insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)
    cd12628
    Location:81 → 156
    RRM2_IGF2BP1; RNA recognition motif 2 in vertebrate insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)
    pfam00013
    Location:198 → 262
    KH_1; KH domain
Nucleotide Protein
Heading Accession and Version

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