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SYMPK symplekin scaffold protein [ Pteropus alecto (black flying fox) ]

Gene ID: 102895083, updated on 11-Apr-2024

Summary

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Gene symbol
SYMPK
Gene description
symplekin scaffold protein
Locus tag
PAL_GLEAN10004048
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006436281.1 (1626677..1659577, complement)

NW_006436281.1Genomic Context describing neighboring genes Neighboring gene DM1 locus, WD repeat containing Neighboring gene radial spoke head 6 homolog A Neighboring gene forkhead box A3 Neighboring gene interferon regulatory factor 2 binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006436281 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Zhang G, et al. Science, 2013 Jan 25. PMID 23258410, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of mRNA cleavage and polyadenylation specificity factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
symplekin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006436281.1 Reference ASM32557v1 Primary Assembly

    Range
    1626677..1659577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006911812.3 → XP_006911874.2  symplekin

    UniProtKB/TrEMBL
    L5KQ26
    Conserved Domains (2) summary
    pfam11935
    Location:166 → 381
    DUF3453; Domain of unknown function (DUF3453)
    pfam12295
    Location:931 → 1112
    Symplekin_C; Symplekin tight junction protein C terminal
Nucleotide Protein
Heading Accession and Version

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