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EP400 E1A binding protein p400 [ Pteropus alecto (black flying fox) ]

Gene ID: 102892751, updated on 30-Mar-2024

Summary

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Gene symbol
EP400
Gene description
E1A binding protein p400
Locus tag
PAL_GLEAN10008707
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
54
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006434829.1 (541249..617602, complement)

NW_006434829.1Genomic Context describing neighboring genes Neighboring gene nucleolar complex associated 4 homolog Neighboring gene DEAD-box helicase 51 Neighboring gene small nucleolar RNA SNORA49 Neighboring gene pseudouridine synthase 1 Neighboring gene unc-51 like autophagy activating kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006434829 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: E1A-binding protein p400

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006434829.1 Reference ASM32557v1 Primary Assembly

    Range
    541249..617602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025045491.1 → XP_024901259.1  LOW QUALITY PROTEIN: E1A-binding protein p400

    UniProtKB/TrEMBL
    L5KS46
    Conserved Domains (7) summary
    smart00573
    Location:747 → 818
    HSA; domain in helicases and associated with SANT domains
    pfam00176
    Location:1041 → 1321
    SNF2_N; SNF2 family N-terminal domain
    pfam15790
    Location:1 → 457
    EP400_N; E1A-binding protein p400, N-terminal
    cl25548
    Location:716 → 871
    DUF4670; Domain of unknown function (DUF4670)
    cl26247
    Location:2919 → 3036
    DNA_pol3_delta2; DNA polymerase III, delta subunit
    cl26465
    Location:1838 → 1981
    SNF2_N; SNF2 family N-terminal domain
    cl28087
    Location:483 → 711
    FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
Heading Accession and Version

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