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ALCAM activated leukocyte cell adhesion molecule [ Pteropus alecto (black flying fox) ]

Gene ID: 102882521, updated on 30-Mar-2024

Summary

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Gene symbol
ALCAM
Gene description
activated leukocyte cell adhesion molecule
Locus tag
PAL_GLEAN10013341
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006430735.1 (171944..352726)

NW_006430735.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC112484609 Neighboring gene 5S ribosomal RNA Neighboring gene Cbl proto-oncogene B Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006430735 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD166 antigen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006430735.1 Reference ASM32557v1 Primary Assembly

    Range
    171944..352726
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015595311.2 → XP_015450797.1  CD166 antigen isoform X1

    UniProtKB/TrEMBL
    L5L4D4
    Conserved Domains (5) summary
    smart00409
    Location:255 → 329
    IG; Immunoglobulin
    pfam08205
    Location:137 → 231
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13895
    Location:346 → 394
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:415 → 489
    Ig_3; Immunoglobulin domain
    cd00096
    Location:137 → 141
    Ig; Ig strand A' [structural motif]

  2. XM_025050925.1 → XP_024906693.1  CD166 antigen isoform X2

    UniProtKB/TrEMBL
    L5L4D4
    Conserved Domains (5) summary
    smart00409
    Location:255 → 329
    IG; Immunoglobulin
    pfam08205
    Location:137 → 231
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:415 → 489
    Ig_3; Immunoglobulin domain
    cd00096
    Location:137 → 141
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:346 → 393
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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