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PTAFR platelet activating factor receptor [ Pteropus alecto (black flying fox) ]

Gene ID: 102882270, updated on 30-Mar-2024

Summary

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Gene symbol
PTAFR
Gene description
platelet activating factor receptor
Locus tag
PAL_GLEAN10015066
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006443568.1 (8000637..8033800)

NW_006443568.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene ATP synthase inhibitory factor subunit 1 Neighboring gene DnaJ heat shock protein family (Hsp40) member C8 Neighboring gene 5S ribosomal RNA Neighboring gene 40S ribosomal protein S10 pseudogene Neighboring gene EYA transcriptional coactivator and phosphatase 3 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006443568 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled purinergic nucleotide receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables platelet activating factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
platelet-activating factor receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006443568.1 Reference ASM32557v1 Primary Assembly

    Range
    8000637..8033800
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025041490.1 → XP_024897258.1  platelet-activating factor receptor isoform X2

    UniProtKB/TrEMBL
    L5JU95
    Conserved Domains (1) summary
    cd15147
    Location:16 → 304
    7tmA_PAFR; platelet-activating factor receptor, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_006924347.3 → XP_006924409.1  platelet-activating factor receptor isoform X2

    See identical proteins and their annotated locations for XP_006924409.1

    UniProtKB/TrEMBL
    L5JU95
    Conserved Domains (1) summary
    cd15147
    Location:16 → 304
    7tmA_PAFR; platelet-activating factor receptor, member of the class A family of seven-transmembrane G protein-coupled receptors

  3. XM_006924348.3 → XP_006924410.1  platelet-activating factor receptor isoform X2

    See identical proteins and their annotated locations for XP_006924410.1

    UniProtKB/TrEMBL
    L5JU95
    Conserved Domains (1) summary
    cd15147
    Location:16 → 304
    7tmA_PAFR; platelet-activating factor receptor, member of the class A family of seven-transmembrane G protein-coupled receptors

  4. XM_015598774.2 → XP_015454260.1  platelet-activating factor receptor isoform X2

    UniProtKB/TrEMBL
    L5JU95
    Conserved Domains (1) summary
    cd15147
    Location:16 → 304
    7tmA_PAFR; platelet-activating factor receptor, member of the class A family of seven-transmembrane G protein-coupled receptors

  5. XM_015598773.2 → XP_015454259.2  platelet-activating factor receptor isoform X1

    UniProtKB/TrEMBL
    L5JU95
    Conserved Domains (1) summary
    cd15147
    Location:49 → 337
    7tmA_PAFR; platelet-activating factor receptor, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version

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