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SLCO4C1 solute carrier organic anion transporter family member 4C1 [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102874692, updated on 10-Mar-2024

Summary

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Gene symbol
SLCO4C1
Gene description
solute carrier organic anion transporter family member 4C1
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Orthologs
human mouse all
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Genomic context

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See SLCO4C1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006400040.1 (558988..593593, complement)

NW_006400040.1Genomic Context describing neighboring genes Neighboring gene 39S ribosomal protein L1, mitochondrial-like Neighboring gene 40S ribosomal protein S18-like Neighboring gene protein tyrosine phosphatase type IVA 1-like Neighboring gene solute carrier organic anion transporter family member 6A1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006400040 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium-independent organic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sodium-independent organic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier organic anion transporter family member 4C1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006400040.1 Reference EleEdw1.0

    Range
    558988..593593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006900687.1 → XP_006900749.1  solute carrier organic anion transporter family member 4C1

    Conserved Domains (3) summary
    cd06174
    Location:125 → 474
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    cd01330
    Location:501 → 554
    KAZAL_SLC21; The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a ...
    pfam03137
    Location:121 → 669
    OATP; Organic Anion Transporter Polypeptide (OATP) family
Nucleotide Protein
Heading Accession and Version

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