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IFI16 interferon gamma inducible protein 16 [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102869652, updated on 10-Mar-2024

Summary

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Gene symbol
IFI16
Gene description
interferon gamma inducible protein 16
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Orthologs
human all
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Genomic context

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See IFI16 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399918.1 (2998175..3118452)

NW_006399918.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene olfactory receptor 6N2-like Neighboring gene poly(rC) binding protein 2 pseudogene Neighboring gene MAK16 homolog (S. cerevisiae) pseudogene Neighboring gene transfer RNA arginine (anticodon UCU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399918 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to interferon-beta IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of interleukin-1 beta production IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-interferon-inducible protein 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399918.1 Reference EleEdw1.0

    Range
    2998175..3118452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006895523.1 → XP_006895585.1  gamma-interferon-inducible protein 16

    Conserved Domains (2) summary
    cd08305
    Location:10 → 84
    Pyrin; Pyrin: a protein-protein interaction domain
    pfam02760
    Location:591 → 758
    HIN; HIN-200/IF120x domain
Nucleotide Protein
Heading Accession and Version

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